| DPOGS211483 | ||
|---|---|---|
| Transcript | DPOGS211483-TA | 309 bp |
| Protein | DPOGS211483-PA | 102 aa |
| Genomic position | DPSCF300113 + 101411-101887 | |
| RNAseq coverage | 1x (Rank: top 94%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL017167 | 2e-16 | 66.67% | |
| Bombyx | BGIBMGA013791-TA | 2e-14 | 70.21% | |
| Drosophila | Nup62-PA | 7e-10 | 52.17% | |
| EBI UniRef50 | UniRef50_F4X182 | 5e-11 | 64.44% | Nuclear pore glycoprotein p62 n=7 Tax=Formicidae RepID=F4X182_ACREC |
| NCBI RefSeq | XP_001606493.1 | 1e-11 | 66.67% | PREDICTED: similar to conserved hypothetical protein [Nasonia vitripennis] |
| NCBI nr blastp | gi|322798697 | 2e-10 | 64.44% | hypothetical protein SINV_03121 [Solenopsis invicta] |
| NCBI nr blastx | gi|156549802 | 3e-10 | 68.18% | PREDICTED: nuclear pore glycoprotein p62-like [Nasonia vitripennis] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005643 | 1.6e-14 | nuclear pore | |
| GO:0017056 | 1.6e-14 | structural constituent of nuclear pore | ||
| KEGG pathway | ||||
| InterPro domain | [6-65] IPR007758 | 1.6e-14 | Nucleoporin, NSP1-like, C-terminal | |
| Orthology group | ||||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS211483-TA
ATGTACCTAAGTGTTGTTGTTCTCATCGCCAGATCCCAAGCCCCTCCAGCGGCTATAACTTCAATAAATTTCGCGGAACTCCAGGAAAATATCAATAAGTGGAGTTTGTCTTTGGAGGAACAGGAGAGGGTTTTCTACAGACAAGCGACTACACTCAACGCCTGGGACAGACTATCGGCGAGTAACGGTGAAAAGACTGACTCGTCCGTGCCACGTGGTGTTCTGGGTTTATACCAGTATATACTCCCATTGATCCTCACCTCGCCTCTGTACGGCCAGCAGCGACGTTGTTTAGTACTTAACATATAG
>DPOGS211483-PA
MYLSVVVLIARSQAPPAAITSINFAELQENINKWSLSLEEQERVFYRQATTLNAWDRLSASNGEKTDSSVPRGVLGLYQYILPLILTSPLYGQQRRCLVLNI-