DPOGS211585 | ||
---|---|---|
Transcript | DPOGS211585-TA | 732 bp |
Protein | DPOGS211585-PA | 243 aa |
Genomic position | DPSCF300084 + 228062-229542 | |
RNAseq coverage | 95x (Rank: top 62%) |
Annotation | ||||
---|---|---|---|---|
Heliconius | HMEL016998 | 4e-32 | 58.40% |   |
Bombyx | BGIBMGA006363-TA | 2e-130 | 93.42% |   |
Drosophila | CG6971-PA | 1e-85 | 67.09% |   |
EBI UniRef50 | UniRef50_O14645 | 5e-81 | 60.47% | Axonemal dynein light intermediate polypeptide 1 n=85 Tax=Eukaryota RepID=IDLC_HUMAN |
NCBI RefSeq | XP_001603164.1 | 2e-91 | 69.67% | PREDICTED: similar to dynein, axonemal, light intermediate chain 1 [Nasonia vitripennis] |
NCBI nr blastp | gi|91091812 | 3e-90 | 69.05% | PREDICTED: similar to axonemal inner arm dynein light chain [Tribolium castaneum] |
NCBI nr blastx | gi|91091812 | 2e-88 | 68.53% | PREDICTED: similar to axonemal inner arm dynein light chain [Tribolium castaneum] |
Group | ||||
---|---|---|---|---|
KEGG pathway | nvi:100119377 | 5e-91 |   | |
  | K10410 (DNALI) | maps-> | Huntington's disease | |
InterPro domain | [50-237] IPR019347 | 1.2e-79 | Axonemal dynein light chain | |
Orthology group | MCL12934 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
---|
>DPOGS211585-TA
ATGGCAGAAAGAGCTCCAGTTTCTGCTGAAGATACGTTAGTTCGTTATGATAATCCAGTATTAGTTACAAAACAACCAGAGAAAATAGTATCCCCAACAACTGGTACGATAGCTCAGCCATGTATTCCTACAGAAGCAAAACGTGAAACTGAAGAAATACTCAATGCGATTTTACCACCTAAAGAATGGGAAGAAGATGGACAGATATGGACTCAGAAGATATCGTCTACTCCAGCAACGAGATTAGATGTGATAAATCTTCAAGAAATGTTGGATACACGTCTACAGCAAAGGCAGGCAAGAGAAACGGGAATATGTCCGGTTCGCAGGCAACTTTATACTCAGTGTTTTGATGAACTCATACGTCAGGTTACTATTAATTGTGGTGAAAGAGGTCTTCTTTTATTGAGAGTACGTGATGAAGCAAGGATAACAATGGAAGCCTATCAGACTTTGTATTGCAGTTCCATTGCATTCGGTATGAGGAAAGCTTTGCAGTCGGAACAAGGAAAATCCGATCTAATGGAACAAGTGGCGAAGTTGGAAGCAGAACGTTCGTCATTAGAGAAGCAGTGTGCAGAACTAAAACAGAAGACTGAGCAATTGGAGCGACGTGCGGCAGAATTACGAGCAGCAGAAGAGAAAAGACATCAAGAAGAGTTACTTGCGCTTAAGAAGACTAACGCTCAGCTCAAGGCACAACTGGAAGGAATTATAGCACCGAAGAAATAA
>DPOGS211585-PA
MAERAPVSAEDTLVRYDNPVLVTKQPEKIVSPTTGTIAQPCIPTEAKRETEEILNAILPPKEWEEDGQIWTQKISSTPATRLDVINLQEMLDTRLQQRQARETGICPVRRQLYTQCFDELIRQVTINCGERGLLLLRVRDEARITMEAYQTLYCSSIAFGMRKALQSEQGKSDLMEQVAKLEAERSSLEKQCAELKQKTEQLERRAAELRAAEEKRHQEELLALKKTNAQLKAQLEGIIAPKK-