Monarch geneset OGS2.0

DPOGS211595
TranscriptDPOGS211595-TA789 bp
ProteinDPOGS211595-PA262 aa
Genomic positionDPSCF300084 + 460134-460991
RNAseq coverage228x (Rank: top 44%)
Annotation
HeliconiusHMEL0025261e-12385.11% 
BombyxBGIBMGA006369-TA7e-12882.95% 
DrosophilaCG12404-PA2e-4641.82% 
EBI UniRef50UniRef50_G6D4D32e-150100.00%Rab GTPase-interacting factor golgi membrane protein n=3 Tax=Endopterygota RepID=G6D4D3_DANPL
NCBI RefSeqXP_001851104.11e-6249.64%YIPF5 [Culex quinquefasciatus]
NCBI nr blastpgi|944690902e-6248.57%Rab GTPase-interacting factor golgi membrane protein [Aedes aegypti]
NCBI nr blastxgi|1565415666e-7055.39%PREDICTED: protein YIPF5-like [Nasonia vitripennis]
Group
Gene OntologyGO:00160203.4e-11membrane
KEGG pathwayphu:Phum_PHUM1295804e-56 
 K12603 (CNOT6, CCR4)maps-> RNA degradation
InterPro domain[97-233] IPR0069773.4e-11Yip1 domain
Orthology groupMCL15036 Single-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS211595-TA
ATGTCCGGCTATCCAAATCCTAATGACTACTCCTGGCAACCTCAAAACAATACTCCTAACTATTCATTCAATACGTCGAATTCATTTGGTGATTCACAAACTTTAGATTTTCAGAATTTCACTGCTGACCAGCAAAATTACTCTTATGATCAAGGACAGAGTATTCCTGCTAACAACAATCAGTACTATAATCCTAATTTATTCACACCTGCACCTATACCTGGGGAATCAACCACAGAAACTTCAGAATTTGATGAACCCCCACTTCTCGATGAGTTGGAGATTTACCCAGACAGAATACTAGAAAAAACTTTAGCAGTTCTAAATCCTTTCCATGGACAATCCAAAGCAGATGATGCAAATTTCTTACTTAAAGACACAGACATTGCTGGACCAATAGCGTTTTGTTTAGCATTAGCTGTGTGTCTATTTCTTTCCGGGAACAAAGCACATTTTGGATATGTGTATGGCTTATCTCTAATGTCTGTTTTTCTGATGTACTTTTTACTATCACTAATGAGTCGCACAGAAGGTGTATTCACTATATACAGTGTAGCAAGTGTGTTAGGATACTGTATGCTTCCAATGGTAGCCTTAGCTGGCTTGGGCATATTTATAACACTGGATGGCAATATAGGCTACATTTTGTCCGCAATAGCTGTTATCTGGTCGGCTCTATCAGCTAGCCGTCTATTTGTTACTATGTCTGGAGATGCAGAACAAAGACCACTCATTGCATACCCGTGTGCTTTAGTTAATGGAGTTTTTGCTCTACTTGTTTTATTTTAA

Protein sequence:

>DPOGS211595-PA
MSGYPNPNDYSWQPQNNTPNYSFNTSNSFGDSQTLDFQNFTADQQNYSYDQGQSIPANNNQYYNPNLFTPAPIPGESTTETSEFDEPPLLDELEIYPDRILEKTLAVLNPFHGQSKADDANFLLKDTDIAGPIAFCLALAVCLFLSGNKAHFGYVYGLSLMSVFLMYFLLSLMSRTEGVFTIYSVASVLGYCMLPMVALAGLGIFITLDGNIGYILSAIAVIWSALSASRLFVTMSGDAEQRPLIAYPCALVNGVFALLVLF-