Monarch geneset OGS2.0

DPOGS211637
TranscriptDPOGS211637-TA354 bp
ProteinDPOGS211637-PA117 aa
Genomic positionDPSCF300325 - 40758-41111
RNAseq coverage3834x (Rank: top 3%)
Annotation
HeliconiusHMEL0066412e-6498.29% 
BombyxBGIBMGA011783-TA4e-6397.41% 
DrosophilaAtg8a-PA1e-6091.38% 
EBI UniRef50UniRef50_UPI0001D541395e-5688.79%UPI0001D54139 related cluster n=3 Tax=unknown RepID=UPI0001D54139
NCBI RefSeqNP_001040244.11e-6197.41%autophagy related protein Atg8 [Bombyx mori]
NCBI nr blastpgi|3010158873e-6097.41%Chain B, Crystal Structure Of Autophagy-Related Protein Atg8 From The Silkworm Bombyx Mori
NCBI nr blastxgi|3010158871e-6097.41%Chain B, Crystal Structure Of Autophagy-Related Protein Atg8 From The Silkworm Bombyx Mori
Group
KEGG pathwaytca:6618474e-59 
 K08341 (GABARAP, ATG8, LC3)maps-> Regulation of autophagy
InterPro domain[2-116] IPR0042411.8e-84Light chain 3 (LC3)
Orthology groupMCL15691 Multiple-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS211637-TA
ATGAAATTTCAATATAAAGAAGAACACTCTTTCGAGAAAAGAAAGACTGAAGGAGAAAAAATACGCAGGAAATATCCGGATAGAGTCCCAGTGGTTGTAGAGAAAGCGCCTAAAGCCAGGCTTGGTAACCTTGATAAAAAGAAATACTTGGTACCATCGGACTTGACTGTTGGCCAATTTTACTTTTTAATCCGAAAACGGATTCACTTGCGCCCGGAAGATGCGCTGTTTTTCTTCGTTAACAACGTAATACCACCAACTTCCGCGACAATGGGTTCGCTATACCAGGAACACCACGACGAAGATTTCTTCCTATACATTGCCTTTTCCGATGAAAATGTTTACGGATATTAA

Protein sequence:

>DPOGS211637-PA
MKFQYKEEHSFEKRKTEGEKIRRKYPDRVPVVVEKAPKARLGNLDKKKYLVPSDLTVGQFYFLIRKRIHLRPEDALFFFVNNVIPPTSATMGSLYQEHHDEDFFLYIAFSDENVYGY-