Monarch geneset OGS2.0

DPOGS211642
TranscriptDPOGS211642-TA2133 bp
ProteinDPOGS211642-PA710 aa
Genomic positionDPSCF300325 + 16168-18300
RNAseq coverage184x (Rank: top 49%)
Annotation
HeliconiusHMEL0066440.083.50% 
BombyxBGIBMGA011784-TA0.068.25% 
DrosophilaRecQ4-PA0.052.90% 
EBI UniRef50UniRef50_B0WK000.055.54%Rothmund-thomson syndrome DNA helicase recq4 n=2 Tax=Culicinae RepID=B0WK00_CULQU
NCBI RefSeqXP_001849034.10.055.54%rothmund-thomson syndrome DNA helicase recq4 [Culex quinquefasciatus]
NCBI nr blastpgi|1700426570.055.54%rothmund-thomson syndrome DNA helicase recq4 [Culex quinquefasciatus]
NCBI nr blastxgi|1700426570.055.54%rothmund-thomson syndrome DNA helicase recq4 [Culex quinquefasciatus]
Group
Gene OntologyGO:00063101.5e-84DNA recombination
GO:00080261.5e-84ATP-dependent helicase activity
GO:00055249.9e-22ATP binding
GO:00043869.9e-22helicase activity
GO:00036769.9e-22nucleic acid binding
KEGG pathway 
InterPro domain[1-708] IPR0045890DNA helicase, ATP-dependent, RecQ type
[3-204] IPR0140011.8e-23DEAD-like helicase
[261-345] IPR0016509.9e-22Helicase, C-terminal
[10-179] IPR0115455.8e-17DNA/RNA helicase, DEAD/DEAH box type, N-terminal
Orthology groupMCL12337 Single-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS211642-TA
ATGTTTGGACACTCCGGTTTTCGTTCTGGTCAGGAGTGTGCAATCAAACGCATACTCTGTGGTCTTTCAACATTATTAATACTATCCACGGGTGGTGGCAAGTCCCTGTGTTACCAACTCCCAGCATATATTTATAGCAAATATTACAAATGTATAACTTTAGTTATATCACCACTAGTTTCACTGATGGAAGATCAGGTATTAAATATGCCAGAATTTCTTAAAGCTGGTTGTTTGCACACAAATCAAAGTCCCACTCAGAGAAAAAAGATTATGGAATTGATAAAAAAAGGTGAAATTAACATACTACTGATATCACCAGAAGCACTTATCGCAGGAGACACATCAAGTGGTTTTGCAGGTTTATTCAAGTCCCTACCACAAATTGCATTTGCATGTATTGATGAAGCTCATTGTGTTTCTCAATGGAGCCATAACTTTAGGCCTAGTTATTTAATGATTTGTAGGGTGTTAAGGGAAAAATTAAATGTGAAGTGTATCTTAGGACTAACAGCTACAGCAAGTCAAGCAACAATTAAAAGTGTCATAAATCATATTAATATTCCTGATGGTGTTAATGGTGTTCTAACAAATCCCGCACTGCCTGACAATCTTTTCCTATCCATATCTTTTGAAAAGGATAAAGACAGAGCACTCGTATCTTTATTGGCTTCCGAAGGAATCAATTCATTCAGTTCTATAATTGTTTACTGTATAAGAAGAAATGAATGTGAAAGGATAGCTGCTGTGATAAGATCGTGTCTTTTCCAGCCTGGTAAGATTAATATGGAAAAAGAAAACAAAAAACGAAAGAGAATGTCCTATATCGCGGAAGCGTACCATGCTGGCATGTATGCTGCTCAGAGGAAGAAAATACAAAAACATTTCATGGATGGTACCTTAAAAATTATAGTTGCGACAGTGGCATTTGGCATGGGTATCAACAAATCAGATATTCGTTGTATTATACATTACAATATGCCTCCAAGTTTTGAGTCCTACGTTCAAGAGGTTGGCAGAGCTGGGAGAGATGGCAAGCCAGCATTTTGTCATGTTTTCATGAATAACAAAAATGACGATAAAGACGAACTATTGAAACATATTTACGCTAACTCAATCGATAGACCTGTTATTAGACGACTTTTGCAGAAAATATTCATACCATGTAAATGCATTTCTCCAGAAAAAACGGATAATTCAAAAATAACCAATGTATCGAGGTGTCAGGGTCATGAAGTAGGTATACCGATAGACGAAACTGTAGAAGAATTAGACTTACCATCAGAAAACATAGCGACTCTATTGTGTTATGTGGAACTTCATCATAAACATTATATAAAAGTTCTGCACAATGCTTACACAAAGTGTAAGATATCTTCATATGGTGGGCCAATAAAAATTTTAGAAGCGGCAAAAACCTGCCCACCCCTCGCTATGGCGTATCTAATAGAAAGTAAGAAGGCTGCTAGTGTAACAAAATTAAATGTCCTAGAATTCAATGTTATAGAGGTAGCAGCGGCTATTGGGTGGGAAAGTGGTATGACTAAGTATCAGCTGAAAAATCTCGAATGGATAGTAAAAGACGGAGTATCGAAAAGGTCTCATCTTAAAGTTGAATTCAATACTTTAGGCTTCAGATTAAAATCACCTGGTGACCTATCAGCCACAGAACTAGATGAACTTCTAGATGATTTGCATCAGAGTGTACATGTACAGGAAAAAAATATGCTGTATCAATTAGAAGAGATACATCAGGCTTTTAACGAACTTTGCAATAAGTCATGCGATCAAATAACATTCTCAGAAGAAAACTTGGCACCAAAATCTAATGAACTGAAATTGATAATAAACGATTACTTCACAAGGGAAAACAACATGCCAGAAAATAAACAATTTCAAGAGAGACCGTTAGATACTGAGAGAATCACATCAGATGTCAGAGCTCTTATAGCAACATACAAGGACTGTAAGTTCACTGGCCGTAGTATAGCCAGAATTTTCCAGGGTATAACATCACCTAATTATCCAGCTCTAGTATGGGGAAGGTGCAAGTTCTGGAGATCACATCTTCACGAGGATTTCAATGGGATCATAAGGATTGCTACGCAACAAATTATCAATATGAAAATTTAG

Protein sequence:

>DPOGS211642-PA
MFGHSGFRSGQECAIKRILCGLSTLLILSTGGGKSLCYQLPAYIYSKYYKCITLVISPLVSLMEDQVLNMPEFLKAGCLHTNQSPTQRKKIMELIKKGEINILLISPEALIAGDTSSGFAGLFKSLPQIAFACIDEAHCVSQWSHNFRPSYLMICRVLREKLNVKCILGLTATASQATIKSVINHINIPDGVNGVLTNPALPDNLFLSISFEKDKDRALVSLLASEGINSFSSIIVYCIRRNECERIAAVIRSCLFQPGKINMEKENKKRKRMSYIAEAYHAGMYAAQRKKIQKHFMDGTLKIIVATVAFGMGINKSDIRCIIHYNMPPSFESYVQEVGRAGRDGKPAFCHVFMNNKNDDKDELLKHIYANSIDRPVIRRLLQKIFIPCKCISPEKTDNSKITNVSRCQGHEVGIPIDETVEELDLPSENIATLLCYVELHHKHYIKVLHNAYTKCKISSYGGPIKILEAAKTCPPLAMAYLIESKKAASVTKLNVLEFNVIEVAAAIGWESGMTKYQLKNLEWIVKDGVSKRSHLKVEFNTLGFRLKSPGDLSATELDELLDDLHQSVHVQEKNMLYQLEEIHQAFNELCNKSCDQITFSEENLAPKSNELKLIINDYFTRENNMPENKQFQERPLDTERITSDVRALIATYKDCKFTGRSIARIFQGITSPNYPALVWGRCKFWRSHLHEDFNGIIRIATQQIINMKI-