Monarch geneset OGS2.0

DPOGS211679
TranscriptDPOGS211679-TA1206 bp
ProteinDPOGS211679-PA401 aa
Genomic positionDPSCF300151 + 402802-404007
RNAseq coverage223x (Rank: top 45%)
Annotation
HeliconiusHMEL0062584e-10546.35% 
BombyxBGIBMGA007809-TA1e-9845.29% 
DrosophilanAcRalpha-30D-PE5e-2023.75% 
EBI UniRef50UniRef50_A8CGN61e-9545.29%Nicotinic acetylcholine receptor subunit alpha 9 n=3 Tax=Obtectomera RepID=A8CGN6_BOMMO
NCBI RefSeqNP_001103399.13e-9645.29%nicotinic acetylcholine receptor subunit alpha 9 [Bombyx mori]
NCBI nr blastpgi|1577838401e-9545.29%nicotinic acetylcholine receptor alpha 9 subunit [Bombyx mori]
NCBI nr blastxgi|1577838407e-10045.29%nicotinic acetylcholine receptor alpha 9 subunit [Bombyx mori]
Group
Gene OntologyGO:00160205.3e-36membrane
GO:00068105.3e-36transport
GO:00052305.3e-36extracellular ligand-gated ion channel activity
GO:00160218e-25integral to membrane
GO:00068118e-25ion transport
KEGG pathwayhsa:570533e-20 
 K04811 (CHRNA10)maps-> Neuroactive ligand-receptor interaction
InterPro domain[30-239] IPR0062025.3e-36Neurotransmitter-gated ion-channel ligand-binding
[34-313] IPR0062018e-25Neurotransmitter-gated ion-channel
Orthology group 
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS211679-TA
ATGTATGTCGGTACGTTTGTGTGGTTCCTGTCCACTCTCCTCGTGTCTAAGGCTGACGGCGACTGTCCAGCTCGTCAGGCAGACCCTCACCACGAGATACGCCTCCACATGAACCTGTCCTGCGCCTCCGACAACAGTTACCGGCCGGTCAAGGATCTAGAGTCCGCCGTCGACGTCAGGCTCAGATTCGACCTCAAGTATATGACCTTCGACGACGACAAGGAGACGGTCACCGTGGTCAGTTGGGTCGTATTCAATTGGAAGAATGAGTTCTTGACGTGGAACGCGAGCGACTACGGCGGCGCCCAGGAGGTCCAGATGGAGAGTTACTCCATGTGGTCACCGATCTTCACCTTACTGAACGCGGACGTGAGCGTGTACACCCCGGGCAGGGTCTACACTACTTGTTTGATCGCCAGCGACGGAGCAGTGACTTGTGTGCCGCAGTTGACACATACGGGGCTCTGCAGCACGGCGCTGAGGAACTGGCCTCACGACCGAAGGAACTGCACACTGTACTACACGTCGTGGATGCAGACGGAGGACAAGGTCAACCTGTCGTTCCACGAGAAGGATCCCGTAGTGTTCCAGGACTTCCAAAGCGCGCCCGGCTGGAGACTCCTGGACATAACACACGCTCGCCTCCCGGGCCAGCGGACCTGTTGCCCTTACAATGATCCCGTGTTGACGATCTCCTTCATCTTAAAGAGGGAAGCTGCGGGTCTCGCGGCCACGGTGCTCATTCCCTCTGTGATCGTAGTGCTACTGACTTGTTCCTCTCTTCTGCTTACAGCCAGCCTTAAAACCCGACTCTCCTTGCTATGTTTCGGTCTGTTCGGACACTTCGTTCTCCTCTCTCAAGTCTGTTTCCTTCTGCCCACATTCAGCTCCGAGACTCCTAGCATATTATTGTTCATCCGGCACTCCATCTTTATAACCTTGCTCTGTGTTTGGGAGACTTTAGGGATCATGTTTCTCATCGGCAAAGTGTCTCCGGCTCCCGGTTGGGTCGTGTCCGCGAACAGCACGCTGATGAATGGACCGGCCAGGTATTTAGTGATCAGTGAGTTCGGTGCGTGTGCGAGCGGAGAGGACAGCGTCCCTGATGACGGACGAGCCAACAGAGAGTGGACGAAGCTCGCCAACTGTACCTACGAGTTTCCTTGTATTTCACTCCCACGCGTACTTAAGACGCTTCCTCCTTAA

Protein sequence:

>DPOGS211679-PA
MYVGTFVWFLSTLLVSKADGDCPARQADPHHEIRLHMNLSCASDNSYRPVKDLESAVDVRLRFDLKYMTFDDDKETVTVVSWVVFNWKNEFLTWNASDYGGAQEVQMESYSMWSPIFTLLNADVSVYTPGRVYTTCLIASDGAVTCVPQLTHTGLCSTALRNWPHDRRNCTLYYTSWMQTEDKVNLSFHEKDPVVFQDFQSAPGWRLLDITHARLPGQRTCCPYNDPVLTISFILKREAAGLAATVLIPSVIVVLLTCSSLLLTASLKTRLSLLCFGLFGHFVLLSQVCFLLPTFSSETPSILLFIRHSIFITLLCVWETLGIMFLIGKVSPAPGWVVSANSTLMNGPARYLVISEFGACASGEDSVPDDGRANREWTKLANCTYEFPCISLPRVLKTLPP-