| DPOGS211846 | ||
|---|---|---|
| Transcript | DPOGS211846-TA | 540 bp |
| Protein | DPOGS211846-PA | 179 aa |
| Genomic position | DPSCF300011 - 1340348-1340887 | |
| RNAseq coverage | 620x (Rank: top 21%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL018050 | 2e-101 | 94.41% | |
| Bombyx | BGIBMGA000925-TA | 4e-100 | 93.85% | |
| Drosophila | CG14216-PA | 8e-69 | 65.92% | |
| EBI UniRef50 | UniRef50_B4H4R4 | 3e-62 | 61.93% | GL18262 n=19 Tax=Pancrustacea RepID=B4H4R4_DROPE |
| NCBI RefSeq | NP_001040442.1 | 2e-98 | 93.30% | Ssu72 RNA polymerase II CTD phosphatase [Bombyx mori] |
| NCBI nr blastp | gi|114052000 | 2e-97 | 93.30% | Ssu72 RNA polymerase II CTD phosphatase [Bombyx mori] |
| NCBI nr blastx | gi|221579697 | 4e-96 | 93.30% | Ssu72 domain protein [Bombyx mori] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0006397 | 8.1e-120 | mRNA processing | |
| GO:0005634 | 8.1e-120 | nucleus | ||
| GO:0004721 | 8.1e-120 | phosphoprotein phosphatase activity | ||
| KEGG pathway | ||||
| InterPro domain | [1-179] IPR006811 | 8.1e-120 | RNA polymerase II subunit A | |
| Orthology group | MCL15301 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS211846-TA
ATGAATAGGAGTATGGAAGCACATGCTTTCTTAGCCAAAAAAGGTTTCAAAGTGAAATCTTACGGGACCGGAGAGAAAGTGAAGTTGCCCGGTGCATCCGCAGACCGACCTAATTGTTATGAATTCGGTGTTCCCTACGACGATATATACAATGATCTGTTAGAAAAAGACAAGGCTTATTATACCCAGAATGGTCTGTTACACATGTTAGATAGGAATCGAAGAATAAAACCTTGCCCAGAGAAGTTCCAAGTGTCAACAGAGCGTTTCGATGTCATAATAACATGTGAAGAAAGAGTTTACGATCAAGTCATAGAATGGTTCGGATCCAAGAGGTCTGTTTACAACCAACCCGTACACGTTGTGAATGTGGACATTCAAGACAATCACGAGGAAGCCACTATAGGAGCTTTCCTGATAAGCGACATGGTCACTAAGATGGCTCAGAGTGACGACTTAGACAATGACATTGACGAGTTACTTCATGAATTTGAATCCAAGTGCCACCGACCCATTCTGAACTGTATCATGTTTTATTAA
>DPOGS211846-PA
MNRSMEAHAFLAKKGFKVKSYGTGEKVKLPGASADRPNCYEFGVPYDDIYNDLLEKDKAYYTQNGLLHMLDRNRRIKPCPEKFQVSTERFDVIITCEERVYDQVIEWFGSKRSVYNQPVHVVNVDIQDNHEEATIGAFLISDMVTKMAQSDDLDNDIDELLHEFESKCHRPILNCIMFY-