Monarch geneset OGS2.0

DPOGS211879
TranscriptDPOGS211879-TA846 bp
ProteinDPOGS211879-PA281 aa
Genomic positionDPSCF300011 - 836821-839415
RNAseq coverage1730x (Rank: top 7%)
Annotation
HeliconiusHMEL0077048e-14585.46% 
BombyxBGIBMGA001252-TA3e-14182.27% 
DrosophilamRpL28-PA1e-7951.03% 
EBI UniRef50UniRef50_Q9VMX01e-7751.03%39S ribosomal protein L28, mitochondrial n=20 Tax=Endopterygota RepID=RM28_DROME
NCBI RefSeqXP_001843603.12e-8353.24%39S ribosomal protein L28, mitochondrial [Culex quinquefasciatus]
NCBI nr blastpgi|3323757752e-8453.55%unknown [Dendroctonus ponderosae]
NCBI nr blastxgi|1972607882e-8353.38%mitochondrial ribosomal protein L28 [Simulium vittatum]
Group
KEGG pathway 
Orthology groupMCL14445 Single-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS211879-TA
ATGGCTTCATCTCGCATTCAGGCAACAGTACGCCAGCTGTCCAAAACTTACAAGAAGAAAACGAGATTTGAAATCGGTATAGCTACAGAGTTACCTACCGCTTATAAGAAGTTTTGGCGAGAATGGAAAGTACTGAAACCAGCTGCGGTGCATTTTATTCCACAAGAGAGCAAGTGGAAGCGGGATGATATTACTGGTGAAACGTTGCCCGTTCAGAACATCCCGTTACCATTAAAGTACCCAGCGGAGATTCATGAGGGAATATGGGGTGGCGAGGCTGTTATTAAAGGTTTTCAAAAGCGAGATCCGAACAGACGCAGAGTTCCCCACTACTGGGTGCCTGTCCTAAAGAGGACTGTAGTCAAATCTGAAGTTCTGAACACACATTTATCAGTCACTGTCACCGATAGAACCATTAAATTAATCAATGACCACTATGGATTTGACCATTATCTGCTTAAGACGCCCGCCTGTGATCTGGTCTCCATGCTAGCATTGAAACTTAAGAAACAAATACTTACCGAACTCATGAACGGATGCCCTAGACATGCTAACAATCCAGAGAAACAAAAAAGTGTTTATGAGGAATATAAGACCTATTTATCTTCGTACACACCCGAGGAAATAGAATGGTATGGTCTCACTTGGTACGAAGCGCTCAACAAAGTCGCTAAACTGAAGGAGGCCGCAAATAAACCGGTGCCTTTGAAACATATGTACAGGAAAAAACTTATAGAGAACCTGCAAGCTAAAGAGAGCCAGAATGATACCAGCACTTCGGATATAGCATCCACGACCTCCTGGCTAGCCAAAATGAATCCGTTCGGCAAGAAGGATGAAGCATAG

Protein sequence:

>DPOGS211879-PA
MASSRIQATVRQLSKTYKKKTRFEIGIATELPTAYKKFWREWKVLKPAAVHFIPQESKWKRDDITGETLPVQNIPLPLKYPAEIHEGIWGGEAVIKGFQKRDPNRRRVPHYWVPVLKRTVVKSEVLNTHLSVTVTDRTIKLINDHYGFDHYLLKTPACDLVSMLALKLKKQILTELMNGCPRHANNPEKQKSVYEEYKTYLSSYTPEEIEWYGLTWYEALNKVAKLKEAANKPVPLKHMYRKKLIENLQAKESQNDTSTSDIASTTSWLAKMNPFGKKDEA-