DPOGS211886 | ||
---|---|---|
Transcript | DPOGS211886-TA | 660 bp |
Protein | DPOGS211886-PA | 219 aa |
Genomic position | DPSCF300011 - 750265-753927 | |
RNAseq coverage | 788x (Rank: top 16%) |
Annotation | ||||
---|---|---|---|---|
Heliconius | HMEL005162 | 1e-122 | 92.24% |   |
Bombyx | BGIBMGA001258-TA | 8e-119 | 89.50% |   |
Drosophila | CG1599-PA | 4e-82 | 58.72% |   |
EBI UniRef50 | UniRef50_G6CND2 | 2e-127 | 100.00% | Synaptobrevin n=4 Tax=Arthropoda RepID=G6CND2_DANPL |
NCBI RefSeq | NP_001037634.1 | 3e-111 | 87.21% | synaptobrevin [Bombyx mori] |
NCBI nr blastp | gi|112983402 | 5e-110 | 87.21% | synaptobrevin [Bombyx mori] |
NCBI nr blastx | gi|112983402 | 6e-104 | 87.61% | synaptobrevin [Bombyx mori] |
Group | ||||
---|---|---|---|---|
Gene Ontology | GO:0016021 | 1.3e-35 | integral to membrane | |
GO:0016192 | 1.3e-35 | vesicle-mediated transport | ||
GO:0006810 | 1.6e-34 | transport | ||
KEGG pathway | tca:663510 | 3e-93 |   | |
  | K08515 (VAMP7) | maps-> | SNARE interactions in vesicular transport | |
InterPro domain | [1-115] IPR010908 | 1.3e-35 | Longin | |
[2-118] IPR011012 | 1.6e-34 | Longin-like | ||
[125-210] IPR001388 | 3.5e-27 | Synaptobrevin | ||
Orthology group | MCL14468 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
---|
>DPOGS211886-TA
ATGCCAATTTTATTTAGTGTGGTTGCTCGTGGAACAGTAGTATTAGCAAAATATGCAACGTGTGCCGGAAATTTCACCGAAGTTACAGAACAAATACTATCGAAAATTCCGCCCCACGATGACAAACTTACCTACTCTCACGGAAATTACCTCTTTCATTACATTGCTGAAAACAAGCTTGTATATTTCTGCATTACCGACGACAAATTCCAACGTTCGAGAGCATTCCTATTTCTGAACGAGATCAAAAGGAGGTTTATAACATCATTTGGGGACACAGCGCAAACCGCTATACCATATGCAATGAACAGTGAATTCGCTAGAATCCTTGCAACAGAAATGAAGCACTACAGTGACTCGAAAGATCTAGAAGCCATATCCAGAGTACACGGAGAGCTGGATGAGCTTAAAAATATCATGGTCAAAAACATAGATAGCATGGCAATGCGAGGTGAAAAACTGGAGTTGCTCGTTAACAAGGCGGATAATCTGGCCACCAGCTCTGTATCATATCGAACGTCAGCGAGGACGTTGCAGCGCTCGTTGTTCTGGAAAAACATGAAGATGTACTTCATCCTAGCGGTGATAGCTGCGTTCGCAATATATTTGATAGGAGCCATGGCGTGCGGCGGACTGGCCTGGAAATCGTGTGTCGCTTAA
>DPOGS211886-PA
MPILFSVVARGTVVLAKYATCAGNFTEVTEQILSKIPPHDDKLTYSHGNYLFHYIAENKLVYFCITDDKFQRSRAFLFLNEIKRRFITSFGDTAQTAIPYAMNSEFARILATEMKHYSDSKDLEAISRVHGELDELKNIMVKNIDSMAMRGEKLELLVNKADNLATSSVSYRTSARTLQRSLFWKNMKMYFILAVIAAFAIYLIGAMACGGLAWKSCVA-