| DPOGS212201 | ||
|---|---|---|
| Transcript | DPOGS212201-TA | 618 bp |
| Protein | DPOGS212201-PA | 205 aa |
| Genomic position | DPSCF300323 - 126065-126682 | |
| RNAseq coverage | 86x (Rank: top 63%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL013284 | 6e-35 | 35.15% | |
| Bombyx | BGIBMGA000994-TA | 3e-69 | 57.92% | |
| Drosophila | Mdh2-PA | 4e-36 | 36.87% | |
| EBI UniRef50 | UniRef50_B4L2P2 | 2e-30 | 33.67% | Malate dehydrogenase n=1 Tax=Drosophila mojavensis RepID=B4L2P2_DROMO |
| NCBI RefSeq | XP_003137632.1 | 2e-36 | 38.00% | malate dehydrogenase [Loa loa] |
| NCBI nr blastp | gi|312069331 | 3e-35 | 38.00% | malate dehydrogenase [Loa loa] |
| NCBI nr blastx | gi|66513092 | 4e-34 | 37.00% | PREDICTED: malate dehydrogenase, mitochondrial-like isoform 1 [Apis mellifera] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0055114 | 1.1e-40 | oxidation-reduction process | |
| GO:0030060 | 1.1e-40 | L-malate dehydrogenase activity | ||
| GO:0006108 | 1.1e-40 | malate metabolic process | ||
| GO:0016616 | 7.7e-33 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | ||
| GO:0005975 | 7.7e-33 | carbohydrate metabolic process | ||
| GO:0003824 | 7.7e-33 | catalytic activity | ||
| GO:0005488 | 3.5e-05 | binding | ||
| KEGG pathway | ame:408950 | 6e-36 | ||
| K00026 (MDH2) | maps-> | Citrate cycle (TCA cycle) | ||
| Pyruvate metabolism | ||||
| Carbon fixation in photosynthetic organisms | ||||
| Glyoxylate and dicarboxylate metabolism | ||||
| InterPro domain | [1-200] IPR010097 | 1.1e-40 | Malate dehydrogenase, type 1 | |
| [40-200] IPR015955 | 7.7e-33 | Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal | ||
| [40-199] IPR022383 | 2.9e-25 | Lactate/malate dehydrogenase, C-terminal | ||
| Orthology group | MCL44291 | Lepidoptera specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS212201-TA
ATGTCGCCGATGCCGTTCGTAGGTATCGCTACGGAACCCATTAACACTTTAGTTCCCATGGCTGCGGAAATAATGAAGAACCATGGGGAATATGATCCCAAAAAAATGTTCGGCATCACAATATTAGATAAGCTGAAAACAGAAGCATTGTACGCCGCGGAAGCCGAAAAGGATCCTCAAAACTGCAACGTCCCAGTGATAGGCGGCCACTCAGAAAAAACCCTGATACCGCTACTGTCACAGGCAGAACCCAAATGTAACTTGGACGAGAAAAGAATACAAGAATTCACATCTAGGGTGAGGTCATCTGATAGCGCAATTTTGAAATCAAAATGCGGATGGTCGCCATCTTTGTCCGTAGCGTACGGCGCTGTGGCATTCACTAAATGTATTATGGATGCTTTGGACGGTCGAACGACTCAAATACAAGCGTACGTTGAAAACAATGACTTCGGCACGTCGTATTTCTCTGGACTGGTCACCGTTGATCAAAATGGAGTTAAGGAGATGCAAAGCTACTCAAACCTATCGTCATACGAATGTCAGTTGTTAGAAAGAAGTATCGAGCAGCTGAGAAAGGAAGTCTTGATGGGGAAGAAGGCACTGGAGCTGGAGTAG
>DPOGS212201-PA
MSPMPFVGIATEPINTLVPMAAEIMKNHGEYDPKKMFGITILDKLKTEALYAAEAEKDPQNCNVPVIGGHSEKTLIPLLSQAEPKCNLDEKRIQEFTSRVRSSDSAILKSKCGWSPSLSVAYGAVAFTKCIMDALDGRTTQIQAYVENNDFGTSYFSGLVTVDQNGVKEMQSYSNLSSYECQLLERSIEQLRKEVLMGKKALELE-