| DPOGS212335 | ||
|---|---|---|
| Transcript | DPOGS212335-TA | 237 bp |
| Protein | DPOGS212335-PA | 78 aa |
| Genomic position | DPSCF300019 - 387364-393131 | |
| RNAseq coverage | 0x (Rank: top 98%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL010451 | 3e-13 | 96.43% | |
| Bombyx | BGIBMGA003895-TA | 7e-07 | 47.22% | |
| Drosophila | knrl-PA | 1e-12 | 92.86% | |
| EBI UniRef50 | UniRef50_UPI0002247661 | 2e-10 | 92.86% | UPI0002247661 related cluster n=2 Tax=unknown RepID=UPI0002247661 |
| NCBI RefSeq | XP_001120662.1 | 2e-11 | 92.86% | PREDICTED: similar to Knirps-related protein [Apis mellifera] |
| NCBI nr blastp | gi|345494163 | 6e-10 | 92.86% | PREDICTED: hypothetical protein LOC100121357 [Nasonia vitripennis] |
| NCBI nr blastx | gi|321465947 | 3e-09 | 100.00% | transcriptional regulator knirps-related-like protein [Daphnia pulex] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005634 | 8.1e-11 | nucleus | |
| GO:0006355 | 8.1e-11 | regulation of transcription, DNA-dependent | ||
| GO:0043565 | 8.1e-11 | sequence-specific DNA binding | ||
| GO:0008270 | 8.1e-11 | zinc ion binding | ||
| GO:0003700 | 8.1e-11 | sequence-specific DNA binding transcription factor activity | ||
| KEGG pathway | ||||
| InterPro domain | [4-53] IPR001628 | 8.1e-11 | Zinc finger, nuclear hormone receptor-type | |
| [2-49] IPR013088 | 4.1e-08 | Zinc finger, NHR/GATA-type | ||
| Orthology group | ||||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS212335-TA
ATGAATCAGAAGTGCAAAGTCTGTGGAGAACCGGCTGCCGGCTTTCATTTCGGAGCTTTCACCTGCGAGGGATGCAAGAGTCTCAAACGACATCGAGAGGTAGAGTTCAGAGGTGAAAGCGTCTGCGGCGCACGTCCCACTATTAAAATTATGCAGCATTATTACACAATGTACCAGAAAATCAAGCGCCTTGATAACATCCTCTTTACGGCTTATAAAATTAATAAAGTTTACTAA
>DPOGS212335-PA
MNQKCKVCGEPAAGFHFGAFTCEGCKSLKRHREVEFRGESVCGARPTIKIMQHYYTMYQKIKRLDNILFTAYKINKVY-