DPOGS212377 | ||
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Transcript | DPOGS212377-TA | 249 bp |
Protein | DPOGS212377-PA | 82 aa |
Genomic position | DPSCF300019 + 332108-332773 | |
RNAseq coverage | 17884x (Rank: top 1%) |
Annotation | ||||
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Heliconius | HMEL005666 | 4e-15 | 41.89% |   |
Bombyx | BGIBMGA004650-TA | 5e-16 | 46.58% |   |
Drosophila | CG14235-PA | 6e-31 | 76.39% |   |
EBI UniRef50 | UniRef50_Q9VWD1 | 1e-28 | 76.39% | CG14235, isoform A n=57 Tax=Opisthokonta RepID=Q9VWD1_DROME |
NCBI RefSeq | XP_002011254.1 | 5e-30 | 75.00% | GI16427 [Drosophila mojavensis] |
NCBI nr blastp | gi|195133654 | 1e-28 | 75.00% | GI16427 [Drosophila mojavensis] |
NCBI nr blastx | gi|195133654 | 4e-31 | 77.78% | GI16427 [Drosophila mojavensis] |
Group | ||||
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Gene Ontology | GO:0004129 | 3.2e-54 | cytochrome-c oxidase activity | |
GO:0005739 | 3.2e-54 | mitochondrion | ||
KEGG pathway | dmo:Dmoj_GI16427 | 2e-29 |   | |
  | K02267 (COX6B) | maps-> | Huntington's disease | |
  |   |   | Oxidative phosphorylation | |
  |   |   | Alzheimer's disease | |
  |   |   | Cardiac muscle contraction | |
  |   |   | Parkinson's disease | |
InterPro domain | [1-82] IPR003213 | 3.2e-54 | Cytochrome c oxidase, subunit VIb | |
Orthology group | MCL10782 |   | Multiple-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS212377-TA
ATGCCTGAAATGATCAAATCACCCAGCGACATCAAAACTGCACCTTTTGATCCGCGCTTCCCAAACCAGAATCAGACAAGGCACTGCTACCAGAGCTACCTGGACTTCCACCGATGCCAGAAGGTTCGCGGCGAAAAATACGAACCCTGCAACTACTTCATGCGTGTGTACAAATCACTCTGCCCCAATGAATGGGTTGATAAATGGGACACCCAGCGCTCCGAGGGCACGTTCCCCGGCAGGATCTAG
>DPOGS212377-PA
MPEMIKSPSDIKTAPFDPRFPNQNQTRHCYQSYLDFHRCQKVRGEKYEPCNYFMRVYKSLCPNEWVDKWDTQRSEGTFPGRI-