| DPOGS212485 | ||
|---|---|---|
| Transcript | DPOGS212485-TA | 456 bp |
| Protein | DPOGS212485-PA | 151 aa |
| Genomic position | DPSCF300222 - 161813-162813 | |
| RNAseq coverage | 1112x (Rank: top 11%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL009507 | 3e-87 | 99.34% | |
| Bombyx | BGIBMGA010222-TA | 3e-87 | 99.34% | |
| Drosophila | UbcD6-PC | 7e-86 | 98.01% | |
| EBI UniRef50 | UniRef50_P63146 | 1e-73 | 86.09% | Ubiquitin-conjugating enzyme E2 B n=353 Tax=root RepID=UBE2B_HUMAN |
| NCBI RefSeq | XP_001654707.1 | 7e-86 | 99.34% | ubiquitin-conjugating enzyme rad6 [Aedes aegypti] |
| NCBI nr blastp | gi|157126694 | 1e-84 | 99.34% | ubiquitin-conjugating enzyme rad6 [Aedes aegypti] |
| NCBI nr blastx | gi|157126694 | 9e-84 | 99.34% | ubiquitin-conjugating enzyme rad6 [Aedes aegypti] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0016881 | 7.6e-53 | acid-amino acid ligase activity | |
| KEGG pathway | aag:AaeL_AAEL002118 | 2e-85 | ||
| K10573 (UBE2A, UBC2, RAD6A) | maps-> | Ubiquitin mediated proteolysis | ||
| InterPro domain | [1-148] IPR016135 | 1.5e-76 | Ubiquitin-conjugating enzyme/RWD-like | |
| [8-144] IPR000608 | 7.6e-53 | Ubiquitin-conjugating enzyme, E2 | ||
| Orthology group | MCL13939 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS212485-TA
ATGTCAACTCCTGCCAGAAGACGTCTGATGAGAGATTTTAAACGTCTCCAAGAAGATCCACCCACTGGTGTATCAGGGGCCCCCACTGATAATAATATAATGATCTGGAATGCTGTGATATTCGGCCCTCACGATACTCCATTTGAGGATGGCACCTTCAAGCTAACTATAGAGTTCACAGAGGAATATCCAAACAAACCACCTATAGTACGATTTGTATCTAAGATGTTTCATCCCAATGTATATGCAGATGGTGGTATCTGTTTAGACATTTTACAAAATAGATGGAGTCCAACATATGATGTGTCAGCTATTTTAACTTCTATACAGTCATTACTTAGCGACCCCAATCCGAACTCACCAGCCAACTCGATGGCTGCACAACTGTATAAAGAAAATCGAAGGGAATACGAGAAACGGGTTAAAGCATGCGTCGAACAGTCATTTATTGATTAG
>DPOGS212485-PA
MSTPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPIVRFVSKMFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNSPANSMAAQLYKENRREYEKRVKACVEQSFID-