| DPOGS212699 | ||
|---|---|---|
| Transcript | DPOGS212699-TA | 720 bp |
| Protein | DPOGS212699-PA | 239 aa |
| Genomic position | DPSCF300012 - 849720-852335 | |
| RNAseq coverage | 139x (Rank: top 55%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL015533 | 2e-47 | 43.27% | |
| Bombyx | BGIBMGA014538-TA | 3e-16 | 54.67% | |
| Drosophila | CG17359-PA | 8e-18 | 27.56% | |
| EBI UniRef50 | UniRef50_Q9VUB3 | 1e-15 | 27.56% | CG17359 n=1 Tax=Drosophila melanogaster RepID=Q9VUB3_DROME |
| NCBI RefSeq | XP_001359871.2 | 7e-17 | 26.61% | GA18174 [Drosophila pseudoobscura pseudoobscura] |
| NCBI nr blastp | gi|198455135 | 1e-15 | 26.61% | GA18174 [Drosophila pseudoobscura pseudoobscura] |
| NCBI nr blastx | gi|189241407 | 2e-19 | 27.75% | PREDICTED: similar to novel KRAB box and zinc finger, C2H2 type domain containing protein [Tribolium castaneum] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005634 | 9.5e-14 | nucleus | |
| GO:0008270 | 9.5e-14 | zinc ion binding | ||
| GO:0003676 | 3.2e-13 | nucleic acid binding | ||
| GO:0005622 | 4.8e-05 | intracellular | ||
| KEGG pathway | dpe:Dper_GL19495 | 5e-14 | ||
| K02215 (CF2) | maps-> | Dorso-ventral axis formation | ||
| InterPro domain | [12-80] IPR012934 | 9.5e-14 | Zinc finger, AD-type | |
| [205-233] IPR013087 | 3.2e-13 | Zinc finger, C2H2-type/integrase, DNA-binding | ||
| Orthology group | MCL26039 | Lepidoptera specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS212699-TA
ATGGAAGAAAAAAGGAAAAATAAATTATTCGACATATGTAGACTGTGTTTAGTGAAACGTGGATTTTGTGATATTACTGACAGAAACGAATTGTGCGATAATATTCACAAATTCACCGGTCTCAAGATATCCGCGTCGGACAAATTGCCTCAGAAAATTTGCAGAAATTGTTTAGACATAGTAAATAAAGCATCAGAATTAAGAAACATGGCTAGGAAGAATGATAAACATTTAAGATCTTTATTTGATTGCCCCGTGGAAGATCCGGTACCGGAATTTGAAGCGGGATCATCAAGTGAGAAGAGTGAAATTGTTTTACAAGAGACGGAAAGAAAATGCTTCTCCCTAGCCGTCAGGCAAGACCTGTTTAACAAATCCAAAACAAATGATGAAGAAGATAGCGAAGCTGTTAATTCTCTGAATCTCATCCACTCAATGAAGCCCGAAAATGAGGACACGGACAGTGAATATAAATGTCCGGTCTGCTCGAAGAATTTTGCAAAATGGAGGAAACTGTACGTACACCATCGCTTGCACAATAAATGTTACAAGTGTCCGATTGATATATGCGTAAAGAGGTTTGCTACAAAAGGAGATCTTGAGAAACATATACGAACACACACGGGAGAAAAGCCTTATGTCTGTAATGAATGTGAGAAACGTTTTGCTCAGCGCGGGACATTGAAGGCTCATAAAGAATCCGTGCACCCTGTAACCTGA
>DPOGS212699-PA
MEEKRKNKLFDICRLCLVKRGFCDITDRNELCDNIHKFTGLKISASDKLPQKICRNCLDIVNKASELRNMARKNDKHLRSLFDCPVEDPVPEFEAGSSSEKSEIVLQETERKCFSLAVRQDLFNKSKTNDEEDSEAVNSLNLIHSMKPENEDTDSEYKCPVCSKNFAKWRKLYVHHRLHNKCYKCPIDICVKRFATKGDLEKHIRTHTGEKPYVCNECEKRFAQRGTLKAHKESVHPVT-