DPOGS212704 | ||
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Transcript | DPOGS212704-TA | 537 bp |
Protein | DPOGS212704-PA | 178 aa |
Genomic position | DPSCF300012 - 794115-796107 | |
RNAseq coverage | 253x (Rank: top 41%) |
Annotation | ||||
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Heliconius | HMEL008328 | 6e-101 | 96.07% |   |
Bombyx | BGIBMGA013120-TA | 5e-43 | 91.67% |   |
Drosophila | Arpc3A-PC | 2e-76 | 72.47% |   |
EBI UniRef50 | UniRef50_O15145 | 2e-68 | 66.48% | Actin-related protein 2/3 complex subunit 3 n=62 Tax=Coelomata RepID=ARPC3_HUMAN |
NCBI RefSeq | NP_001041679.1 | 1e-95 | 91.01% | Arp2/3 complex subunit [Bombyx mori] |
NCBI nr blastp | gi|283580029 | 3e-98 | 95.51% | Arp2/3 complex p21 subunit [Spodoptera frugiperda] |
NCBI nr blastx | gi|283580029 | 7e-96 | 95.51% | Arp2/3 complex p21 subunit [Spodoptera frugiperda] |
Group | ||||
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Gene Ontology | GO:0030833 | 2e-123 | regulation of actin filament polymerization | |
GO:0005856 | 2e-123 | cytoskeleton | ||
KEGG pathway | cqu:CpipJ_CPIJ013834 | 5e-84 |   | |
  | K05756 (ARPC3) | maps-> | Shigellosis | |
  |   |   | Pathogenic Escherichia coli infection | |
  |   |   | Regulation of actin cytoskeleton | |
  |   |   | Bacterial invasion of epithelial cells | |
  |   |   | Fc gamma R-mediated phagocytosis | |
InterPro domain | [2-178] IPR007204 | 2e-123 | ARP2/3 complex, p21-Arc subunit | |
Orthology group | MCL14167 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS212704-TA
ATGCCAGCGTATCATTCCACATTAGTTGATTACACGCAATCGGTAGGCAATTTGGCTCTGTTGCCTATTCGCACTACGTTCAGAGGGCCGGCGCCCACTAGCCCTAAGATAGAACTTGATATAATTGATGAAGCTTTAAATTATTTTAAGGCCAACGTTTTCTTTAGATTTTACGAAATAAAGTCTGATGCAGATAGAGTCCTCATTTATTTGACTCTGTATGTTTCGGAATGTCTGAAGAGGTTACAGAAATGCTCTAACAAGAATCAGGGCCAGCAAGAGATGTATATGTTGGCTATATCTAAATTTGACATTCCTGGTGAGAGTGGTTTCCCTCTCAATTCTGTGTACGCAAAACCCTCTGGCCCTCAAGAATCAGATTTGATGCGCCAGTACCTTCAACAACTGAGACATGAGACTGGAACTCGGGTGTGTGAAAAGGTGTTTGCGACCGAAGACGGGAAACCCAGCAAGTGGTGGCTCTGTTTCGCCAAAAGGAAATTCATGGACAAATCCCTGTCTGGCCCCGGCCAGTAG
>DPOGS212704-PA
MPAYHSTLVDYTQSVGNLALLPIRTTFRGPAPTSPKIELDIIDEALNYFKANVFFRFYEIKSDADRVLIYLTLYVSECLKRLQKCSNKNQGQQEMYMLAISKFDIPGESGFPLNSVYAKPSGPQESDLMRQYLQQLRHETGTRVCEKVFATEDGKPSKWWLCFAKRKFMDKSLSGPGQ-