DPOGS212895 | ||
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Transcript | DPOGS212895-TA | 579 bp |
Protein | DPOGS212895-PA | 192 aa |
Genomic position | DPSCF300410 - 47452-48030 | |
RNAseq coverage | 144x (Rank: top 54%) |
Annotation | ||||
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Heliconius | HMEL016128 | 4e-55 | 80.53% |   |
Bombyx | BGIBMGA003226-TA | 2e-73 | 69.19% |   |
Drosophila | wdn-PA | 5e-34 | 37.72% |   |
EBI UniRef50 | UniRef50_F4X6L0 | 3e-42 | 50.00% | GS1-like protein n=29 Tax=cellular organisms RepID=F4X6L0_ACREC |
NCBI RefSeq | XP_001607082.1 | 3e-33 | 39.64% | PREDICTED: hypothetical protein [Nasonia vitripennis] |
NCBI nr blastp | gi|345482885 | 3e-42 | 50.59% | PREDICTED: zinc finger protein 43-like [Nasonia vitripennis] |
NCBI nr blastx | gi|345482885 | 2e-46 | 50.59% | PREDICTED: zinc finger protein 43-like [Nasonia vitripennis] |
Group | ||||
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Gene Ontology | GO:0003676 | 3.8e-11 | nucleic acid binding | |
GO:0008270 | 2.8e-05 | zinc ion binding | ||
GO:0005622 | 2.8e-05 | intracellular | ||
KEGG pathway |   | |||
InterPro domain | [77-104] IPR013087 | 3.8e-11 | Zinc finger, C2H2-type/integrase, DNA-binding | |
Orthology group | MCL26783 |   | Lepidoptera specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS212895-TA
ATGAAGTGTGATCATTGCGAGAAAGTTTTTAAAACAAGAGCCAATCTCTTGCAGCATAAATTACTCCACACCGAGAGGATACGGAATTTTGCATGTCATATATGCGGCAAGATGTTCTTCACCAAGGGCACCTTAGTAACACACATGGTTACTCACGAAGACACAAAGCCTTTTAAATGCGACCACTGTCCCTTGACCTTCCGAGCTAAAGGCAACCTTATATCCCATATATCATTACATTCTGGCCTCAAACCGTTCATATGTGAGCAATGTGGTAAAAGTTTCAGAGTTAAAAGACACTTAATGTCACATTCCATAGTACACACAGATCTAAGACCATTCGTTTGTGAGTACTGCCATAAGGCTTTCCGTTTTAAGACCCGTTTAAATCTCCACCTACGACAACACACCGGGGTCAAGCCGTACAAATGTGTTTACTGCCAACGAGATTTCACTAACGGATCCAATTATAAGAAACACATGAAGAGACGCCACGGCATCGACACATCATCGAGAATAATGTTCAACAACTCAAATCCCGTCAAAGTTGGTGCTTTTAATTTAAAAGCAAATTCATAA
>DPOGS212895-PA
MKCDHCEKVFKTRANLLQHKLLHTERIRNFACHICGKMFFTKGTLVTHMVTHEDTKPFKCDHCPLTFRAKGNLISHISLHSGLKPFICEQCGKSFRVKRHLMSHSIVHTDLRPFVCEYCHKAFRFKTRLNLHLRQHTGVKPYKCVYCQRDFTNGSNYKKHMKRRHGIDTSSRIMFNNSNPVKVGAFNLKANS-