| DPOGS212949 | ||
|---|---|---|
| Transcript | DPOGS212949-TA | 450 bp |
| Protein | DPOGS212949-PA | 149 aa |
| Genomic position | DPSCF300057 - 65739-68004 | |
| RNAseq coverage | 2037x (Rank: top 6%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL014258 | 1e-73 | 72.82% | |
| Bombyx | BGIBMGA001733-TA | 8e-68 | 86.43% | |
| Drosophila | CG15735-PA | 3e-22 | 38.69% | |
| EBI UniRef50 | UniRef50_E2AUX3 | 2e-41 | 60.90% | Protein LSM12-like protein n=7 Tax=Formicidae RepID=E2AUX3_CAMFO |
| NCBI RefSeq | XP_001607591.1 | 6e-46 | 62.77% | PREDICTED: similar to conserved hypothetical protein [Nasonia vitripennis] |
| NCBI nr blastp | gi|156543995 | 1e-44 | 62.77% | PREDICTED: protein LSM12 homolog [Nasonia vitripennis] |
| NCBI nr blastx | gi|242014066 | 4e-45 | 63.97% | conserved hypothetical protein [Pediculus humanus corporis] |
| Group | ||||
|---|---|---|---|---|
| KEGG pathway | ||||
| InterPro domain | [41-128] IPR019181 | 6.8e-21 | RNA-processing, Lsm domain | |
| Orthology group | MCL14281 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS212949-TA
ATGTTGATCCTAAAATGCCCATCATCCAGCGGTAATCCCAAACGCCACGACGTCCACATCGTGAACCTGTCCCTGGTCAGCGACGTTCAGATCAAGAAGGAGGTTACAACTGTCCCGGAGCCGCCACAGTCGTTGAATCTTCACAGGCTCAACACCAGAGTTAGGAATTCAATTGAAAACAAAAAGCGACTAGTTTCAGCTTTATCAGCGTGTCTAGACCCCGAGGGTCAAAGGCTGTTTCTAGCCATCGCCAGGGTCATTGATGATGTTTCATGGTCGGGGCAGAGTATCCGAGTCTACAATGAAGTCACAATCACACCGCCATATAAGGTGGAAAACGTGCTGGGCGAGCAGGACTCCAAGCCGTATAACTACATCCGAAAGTTCGTCGAGCGTCACTGGCGCGATCACCGCGACCACACCGCCGCCAACTGTTCACGACACCAATAA
>DPOGS212949-PA
MLILKCPSSSGNPKRHDVHIVNLSLVSDVQIKKEVTTVPEPPQSLNLHRLNTRVRNSIENKKRLVSALSACLDPEGQRLFLAIARVIDDVSWSGQSIRVYNEVTITPPYKVENVLGEQDSKPYNYIRKFVERHWRDHRDHTAANCSRHQ-