| DPOGS213015 | ||
|---|---|---|
| Transcript | DPOGS213015-TA | 363 bp |
| Protein | DPOGS213015-PA | 120 aa |
| Genomic position | DPSCF300024 + 109274-114369 | |
| RNAseq coverage | 15x (Rank: top 82%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL008201 | 2e-32 | 68.48% | |
| Bombyx | % | |||
| Drosophila | % | |||
| EBI UniRef50 | UniRef50_A5D6V4 | 1e-11 | 41.11% | Transmembrane protein 17B n=2 Tax=Clupeocephala RepID=TM17B_DANRE |
| NCBI RefSeq | XP_001175842.1 | 5e-15 | 44.44% | PREDICTED: similar to Transmembrane protein 17 [Strongylocentrotus purpuratus] |
| NCBI nr blastp | gi|115941563 | 1e-13 | 44.44% | PREDICTED: similar to Transmembrane protein 17 [Strongylocentrotus purpuratus] |
| NCBI nr blastx | gi|115941563 | 4e-15 | 44.44% | PREDICTED: similar to Transmembrane protein 17 [Strongylocentrotus purpuratus] |
| Group | ||||
|---|---|---|---|---|
| KEGG pathway | ||||
| InterPro domain | [13-92] IPR019184 | 1.9e-17 | Uncharacterised protein family, transmembrane-17 | |
| Orthology group | MCL20739 | Patchy | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS213015-TA
ATGGAATATGCTACAGTGTTAAACTTTCAAAAATGTTTATATCTGAATGTATATATTTATATTGTTTGGGTGGTGGTAAATTCTTACTTTCTATTTATTAAGGTTTTAAAGCTGGAGCATTTGTCAAGGTATTTATCTATTACGGTGTTCATCCTTCTTACTGTAATTGAATTTGTAAGACTCTACCTTGGTCATTATGGAAATTTATCATGCAGAGTTCCAGAACTGGCAGGATTTTTGATGTTAACTGTCTTGATGCAAATACCGCTTATCACAAACAGGATTCCTTTCAAAAAATTCATCAATTTTGCTTCTTACTCCATGTTAAGTGTTGCTTTGTACATTCAGCTCCTTAAAACATAA
>DPOGS213015-PA
MEYATVLNFQKCLYLNVYIYIVWVVVNSYFLFIKVLKLEHLSRYLSITVFILLTVIEFVRLYLGHYGNLSCRVPELAGFLMLTVLMQIPLITNRIPFKKFINFASYSMLSVALYIQLLKT-