Monarch geneset OGS2.0

DPOGS213088
TranscriptDPOGS213088-TA900 bp
ProteinDPOGS213088-PA299 aa
Genomic positionDPSCF300016 - 295621-297559
RNAseq coverage270x (Rank: top 40%)
Annotation
HeliconiusHMEL0097873e-15183.61% 
BombyxBGIBMGA007698-TA3e-1374.42% 
DrosophilaRrp4-PA2e-10663.67% 
EBI UniRef50UniRef50_Q138681e-9060.74%Exosome complex component RRP4 n=106 Tax=Opisthokonta RepID=EXOS2_HUMAN
NCBI RefSeqXP_001868042.13e-11169.28%exosome complex exonuclease RRP4 [Culex quinquefasciatus]
NCBI nr blastpgi|1700658375e-11069.28%exosome complex exonuclease RRP4 [Culex quinquefasciatus]
NCBI nr blastxgi|1700658371e-10569.28%exosome complex exonuclease RRP4 [Culex quinquefasciatus]
Group
KEGG pathwaycqu:CpipJ_CPIJ0178097e-111 
 K03679 (RRP4, EXOSC2)maps-> RNA degradation
Orthology groupMCL15076 Single-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS213088-TA
ATGACTGGCCATGTGTCTATAAGATTAGCATCGGAACGAGTAAACCATTGTGTTCCTTGTCCAAATGAATTACCACGGTTTTATACACCGGGAGAGGTTATAACTGGCATGCAAGACTTTATGCGTGGCCATGGAACATATGCAGAAGATGATTCCCTCAAGTCATCAGTTGCTGGTGTAATGCAAAAAGTAAACAAATTAATATGTGTTCGACCATTAAAAAGTAGATATGTTGGAGAAATAGGTGATGTTATTGTAGGACGTGTTCTTGAAGTTCAACAAAAGAGATGGAAAGTAGAGACCAACTCTCGTTTAGATTCCATTTTACAATTGTCATCTGTAAACTTACCAGGAGGAGAATTGCGTAGAAGATCAGCTGAAGATGAACAAATGATGAGGAAACATTTACAAGAAGGAGACCTCATAAGTGCTGAAGTTCAAAGTGTTTTTTCTGATGGTTCTCTGTCCTTACACACAAGAAGTTTGAAATATGGCAAGTTATCACAAGGTGTCCTAGTTAAAGTATTTCCGTCATTGATTAAGCGAAGAAAGAATCACTTCCATAACTTGCCCTGCGGTGTTTCAATAATAATAGGAAACAACGGTTATATATGGATAAGTCCTCACAAACAAGACGTTATACTGGAGGACAACCATGATGAAATAGAGAACTACGACCATCAAGCTGTTAAAAGATCGGACAGAGAGATTATAGCAAGAGTTAAGAACTGTATCAGCGCACTGGTGGCCTCGAAGATGATGCTAGACGATACAAGTATTATGTTTGCATTTGAACAGAGCCTCAAATATGATAATGTGAAGGAACTCTTGGATCCAGAAGCCATGTTGGATGTAGCGTTCCTTACACAACACATGCTAAATGATATTACTGAAGACTAG

Protein sequence:

>DPOGS213088-PA
MTGHVSIRLASERVNHCVPCPNELPRFYTPGEVITGMQDFMRGHGTYAEDDSLKSSVAGVMQKVNKLICVRPLKSRYVGEIGDVIVGRVLEVQQKRWKVETNSRLDSILQLSSVNLPGGELRRRSAEDEQMMRKHLQEGDLISAEVQSVFSDGSLSLHTRSLKYGKLSQGVLVKVFPSLIKRRKNHFHNLPCGVSIIIGNNGYIWISPHKQDVILEDNHDEIENYDHQAVKRSDREIIARVKNCISALVASKMMLDDTSIMFAFEQSLKYDNVKELLDPEAMLDVAFLTQHMLNDITED-