Monarch geneset OGS2.0

DPOGS213125
TranscriptDPOGS213125-TA5352 bp
ProteinDPOGS213125-PA1783 aa
Genomic positionDPSCF300016 + 472895-486055
RNAseq coverage684x (Rank: top 19%)
Annotation
HeliconiusHMEL0071860.080.24% 
BombyxBGIBMGA007885-TA0.074.16% 
DrosophilaCG42684-PA0.048.37% 
EBI UniRef50UniRef50_B0X3280.039.90%Synaptic ras GTPase activating protein n=4 Tax=Eukaryota RepID=B0X328_CULQU
NCBI RefSeqXP_001120165.10.042.23%PREDICTED: similar to CG32560-PA [Apis mellifera]
NCBI nr blastpgi|1700564830.039.90%synaptic ras GTPase activating protein [Culex quinquefasciatus]
NCBI nr blastxgi|1571694480.036.49%synaptic ras gtpase activating protein, syngap [Aedes aegypti]
Group
Gene OntologyGO:00056227.2e-76intracellular
GO:00510567.2e-76regulation of small GTPase mediated signal transduction
GO:00050967.2e-76GTPase activator activity
GO:00071651.7e-70signal transduction
GO:00055154.9e-08protein binding
KEGG pathwaybfo:BRAFLDRAFT_2068502e-32 
 K04352 (RASA1, RASGAP)maps-> Axon guidance
    MAPK signaling pathway
InterPro domain[604-945] IPR0019367.2e-76Ras GTPase-activating protein
[624-992] IPR0089361.7e-70Rho GTPase activation protein
[1689-1755] IPR0218876e-18Protein of unknown function DUF3498
[429-602] IPR0089734.9e-08C2 calcium/lipid-binding domain, CaLB
Orthology groupMCL10749 Multiple-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS213125-TA
ATGTCTGAGACTTTATCCCCTAACTCCTCGCCCAGCTGCGACGAGAATAGCAGACGCCGCTCAGTGTTCTACGTACCGTTATTCGAAAGTTTCGATAACTACTTGCCTCTGACCCCGGAGGAGAAAGAAGCAATTCTATGCGGTCAGAATGTTGAACAAACTCCTAAAAAACCGAGGCGAAAGAATACAGCGGAGTATGGAAGGTTGCACATACATTCCCGTGCGGAGACGTCTTCTATTGAAAGTGAAAGTGATTTCAGTCCTGTCAGACGATATCCACGACCTTTGTCGTCGAGAATGAGTTCCAATGAAGCATTGGCAAGAGAAGGTCAAAGCGATCTCACGAGTCCCAGGCTTGTCGCTGAGAGCAATGTCATTCGCCATAGACATCCAAGACTACGTACAACGACGTCATGTGAACCGCGTTACGATAGAATATATTCCCCTCTCACAACATCGATCTCATCAAACAAACTGAACAATTCAACTTCAAGTATAAGCGTCAGATTGCCCTCAAAAAATCCCATACGCAACTCTAACCTTTCTTTAATACCCGATGCGCCGAAGATGCTTTCCCCGCCTAAAGAAAAATCAAAAACATTGCCGCAAAATTTAAATACACCTTCACCGATTCGAGGTAGTAGTAGTTCTACGTCTATATTCAAAACCCCGAAAATCACTGTGACGCCTGAGAGTCCCCATAAGAGTCCAGGGAAAATGACGGGACTTAACTTTATTAGGCGATCGAGGAGCACGAAATTGTCTAGAAGTAACTCTCTGCTCCGAAGTATAACTGCTAGATACATCGAGGAAGGGCTCGAAGACAATGTGGCTGTAATAACGGACTTGACGGACAATTATAATAAGTTTGTGGACGATAACGGCGGTGAAAAAGAGGTTATTTGTGCTTTAATTAAGAAAAATGAAGAGCAGATTACGAATAGTCCCCTCAGTATGAGACGGACTTATTTGGACGCCGATGACGATTTAGCTGTTCACTCCGATACGTCATATGAGACGTCATGTCGGCGCGGCTCGGCTCCAAGCACGCCAATACCCGGGACCCAAGCCCAGCACAGTCCCTCGCGACTCGCATCCTTCTTCTTCTCAAAGCGATCCTTCAGAAGCAATCCACTCAAACGGACGAAGTCAGCCGCCAAGATAGAAAGCAAGCAAGTCCTTGCAGCTGTTCCAACACATCCAGCGACACATGCTTTGAGGACATCCAGATCTCATGAAAGTCTCCTATCAGCACAATCGCCAGCAGTATCAACAATGGATCTCGGACCCCCCAATCAGGTTGAGATTCGTGCCCTCCATTCGTCTGTACTGGGCAGGCCGCATTGTTTCGCACTGAGCGCTGAGAACCGCGCGCCGCGTTACTTCGCGTGCGCCTCCAGAAAGGAAAGAGATCGCTGGATTTACAGCTTACGTCAGGCCGCTCGTCCTGATGAGATGCGGACGCGTCGCTGCGAACGGACGGTGAAGCTTTGGTTATTGGAGGCTAAAGCCATACCGCCGAAGAAGAGATACTACTGTGAAATACTACTGGATGACAATCTACATGCGAGGTCTTCATCCAAGTTAAAGACCGAACTGTGTTTCTGGGGCGAGGTGTACGAGTTCTGTTCTCTACCGCCTGTGAGATACATTAATGTGAACGTTTACCGCGAGCCGGAGAGACGACCGCGGAAAAGAGACAAACATGCACTAGTCGGTACAGTTCGCATCCCTGTGGACGATGTGTCCTCTCGGTACCCCAACGAGCGCTGGTACCCCATCAGCGAGGACAAGCCGCAGTCGCCGGCCCGCGCGCCCGCCCCCCTCCCCGCGCTACGTATCAAGTGCCGGTATCAATGCGTCGATGTCTTACCAATAGACTGCTACGTAAGGTTCCTGGATTATCTAAAGAAGAACTACAGACGTCTCTGCGAGTACTTGGAGCCGGTTATCGGTGTGAAAGCTAAGGAGGACATAGGTTGTGCTCTCGTGTTGTGTATGGCGGGGGCTGGTCTTGCGCCGCGGTACTTGGCGGATGTGGTAGCGTTGGACGTGCGGCGGACTGGCGACCACTCTCTCACATTCAGGGGGAACTCCCTCGCCACTAAGAGCATGGAGGCCTACCTTAAACTCGTCGGAGATCAGTATCTGCAGGATACGTTAGGAGAGGCGGTGCTGTCAGCGGCTGGTCCAGGAGCTCCAGAGTGTGAGGTGGATCCTCTCCGTGCCGGTTCAGGCGCGGCTCTGAGACGACATCAGGCAGCGCTCCGGGACACGGTGTCCCTCGCCTGGTCCGCCATCGCATCCTCCGCGACACGCTTCCCCCCACCACTGAGGGACTGTTTTGCTACCTTCCGCGAAAGGCTAGCATCAATGGGCCGGGAGGATATTTCAGATAACCTTATAAGTGCTTCAATTTTCCTTCGTTTCCTTTGTCCTGCTATTCTCTCTCCCAGTCTCTTTGGAATAATTCACGAATACCCTAACGAGCGAGCTGCGCGTAACTTGACTCTGGTGGCGAAGACTTTGCAAACGTTGGCCAACTTTACGCGCTTCCAGGGCAAGGAGGCTTTTATGGAGTTTCTCAACGACTTTTTGGAACAGGAGGCACCCAATATGAAAGCCTTCCTAAGGGCTATATCGACGAGACCTCAAGAGCAGCAGCAACACCAAACCAGCCAGCAACAGCAGCAACACCAATCCAGCCAACAACAGCAGCAACAGAGCAACCAGTCAGATAGCAAGCGAAACTCATCCACATCCCATTCATCCGTGGAGGGGGAAGTGGACCCTGATCCTGAATGGGCCCCCCACGTCGATCTCGGCAAGCAACTGGCAACGCTGCACTCCTTGCTAGTGGACAGTCTCCCTAAATTGTGCGCTGCCAAAATACAGGAGCTCGATCCGCTGTCTGATATTTTAGATGAACTCAGCAAGAGATTATTGAGCAACGACAATGGACCGATACCTCAAATCGGCGACAATATATTTAGGTTCAATGATCCGACATGTAACGCCCAAACAAAACAGAACAACGAAACATCTACAAATGGTCCGCTGACGAATAATTTTGCTCACAGTTCGCCTATAATGAACAAAAATGGCGTACAATTTAATATAAGTCCATCGAAATCGAACGCCGAGGACTCTAAATATAAGGGATCGTTTGCAACTGTTTCTAAATCACCGAGTTTCAATCTACGCTCGGCGACGCTCCCGAGAAACGGATACGGTACGAATCAAGTCAATCAAAACGTCAACCCAGATAGATACAGCTCGCAGTACAACAACCAAGAGCATTGTGTCAATTTGAAAGTCGTACAAATTGGCTTCGGTTCGGATCAGTATCCCAAAGGCATCAGTAACAGTGTGAATGAAAACGAGAGAAGATTTCAGGATAGATATAAACCTAATAACTTTAACCAAGGGCATTTCCACAACACTAATTACAACAGCACCGAACGCTCACCCAGCAGCGACAGCATCAATCACAATTACTGCTCAAACGACATGCAGAATATTATGAAGGAAACGGCGACGCTGGATGAACTATCAGATCTTTTAAAATACGCTGACGATTCGGATATAGTTGATGAAAAAATGATGAACAAGAAGAATATATCACAATCCAAGACCAACAATAATAACATTATAAACGGAAACAAAAATTCATACACGAACAACGGCTCGAACGTGTCTATTAGCGGCTTGTCAAATGTCGCGAGCTCAGGATACCAAAGCATTGCTACGTACAGTCAAAGTTCCAGTCCAATCGAAAACGCGACTCATCTCCACCAAGCCTATGAAAACGGTGGACAGCCAATGAGCCGCTACTCACAACTGAATTACCAAAAGCAGAGAGATAAGCAGTATTACGAAAATAAAAATGAAAAGTTCTATCCAAAGAGCCCAGTGCAGCAAAAAATCGAATACGATATCCAGAAATACGGCATACAGAACTTCACGACCGCCGACAACGTTCAAAACAACACAAACGCTAATACTAAAGTGGCACCGCTTGTTTTTACAAATCCTGTTTACAATATGGAGGACAACAGACAGTCACAGGATGTGAAGAAACCTAATGAAAACAGAAACTCCAAGCGATGTCCATGCGGCTCATCCAGTTCATCCATTGATGAGGAGGGCTTGAGCACTGACAACGTGGAGACAAACTCCGAAGAAGGTTCTACCAACTTCAATGATGATAGAAACTTCGACAAGCAGAATCGTAACGCAACCCACCGAAAACTCACCAGAGATAATTGTAATTACGAAGACGTGTACCAGAGGACAACTAATCATAGTAGCTCTCCTAGAATAAGAGACGATGAATCTTCTAGTAATTCTCCTAGCTTACGAAAAGCCAGCAAGACGCGAATGCCTAGAACGAATCCGATGCTCTCTTACTCGACTAACCAAAACCAACTCAACCTGAAGCATTTCGGTCAGCGGGGTGAATCTTTATACGAGAGTAAGCCTCACCACATCTCCACTGATTCTGGATATCCGATGAGCAGATCTGATTCCAACGTGGAAGAAGTGAACAAAGAAATGTATAGATTGCAAATATCTCGAAGTCAGAAAGCGTTATATAACATGGAAAATTCGAAAAATTCTCCAGAGAAGTTTATTGCGGAGAATTCCATACCGGAAACAAACTATCCTCTGGATAGAACGTACTCCGGAGCCAAGATATCCAGTAGCAGGTTAAACGAGGATCTGGAAAGACATCAAGACTATTATGGTGTGAGAGAAAGACGGGAATCTCCTTCGCGAGGTTTCAATAGGGAGTCGCATTCAAGCGAGGCGAGTGAGAGGGTGCCAGTGAGGGTCGACAGAGAAGCTCCTGTGAGAGACAAGTTGCAACGAAGACTTAGCTTAGAATCAGCCAGGGAACTCACTGACAGTTCAAGCGAAGTGGACGACACTTTTTATAGTACAACTGGCAGGAAGCGAGCGAACAAGCACCACAGAACCATTGAACAGTATGAACGTGAAATAGAGAGGCTAAAATGTTCAGTGGAACTTCTAAGGGGGCGCTTGGGGCCAACTGATTCTGGCCAAGATCAAACAGATGCCAAAATGAAGGCTATTATATCCAGATTAATTTGCGTAGAAGAGGAGCTTCGCCGGGAACAGCGTAAGATGGCCGCCGCTCTGTCACACAAGCAACGCGTGATTGAAGCCCAGGAACATCGTATAGCAGCTCTAGATGAAGCTAATACGAGGCTATTATCAGCTCTCGTTCACTTGCAACAGAGAGCACCCCACCCTCCCTCACACAACAACAACCATAGCACCTCCCACTCCCCCCACTCACAACACTCGCATCAGGAATTACAGATTTAA

Protein sequence:

>DPOGS213125-PA
MSETLSPNSSPSCDENSRRRSVFYVPLFESFDNYLPLTPEEKEAILCGQNVEQTPKKPRRKNTAEYGRLHIHSRAETSSIESESDFSPVRRYPRPLSSRMSSNEALAREGQSDLTSPRLVAESNVIRHRHPRLRTTTSCEPRYDRIYSPLTTSISSNKLNNSTSSISVRLPSKNPIRNSNLSLIPDAPKMLSPPKEKSKTLPQNLNTPSPIRGSSSSTSIFKTPKITVTPESPHKSPGKMTGLNFIRRSRSTKLSRSNSLLRSITARYIEEGLEDNVAVITDLTDNYNKFVDDNGGEKEVICALIKKNEEQITNSPLSMRRTYLDADDDLAVHSDTSYETSCRRGSAPSTPIPGTQAQHSPSRLASFFFSKRSFRSNPLKRTKSAAKIESKQVLAAVPTHPATHALRTSRSHESLLSAQSPAVSTMDLGPPNQVEIRALHSSVLGRPHCFALSAENRAPRYFACASRKERDRWIYSLRQAARPDEMRTRRCERTVKLWLLEAKAIPPKKRYYCEILLDDNLHARSSSKLKTELCFWGEVYEFCSLPPVRYINVNVYREPERRPRKRDKHALVGTVRIPVDDVSSRYPNERWYPISEDKPQSPARAPAPLPALRIKCRYQCVDVLPIDCYVRFLDYLKKNYRRLCEYLEPVIGVKAKEDIGCALVLCMAGAGLAPRYLADVVALDVRRTGDHSLTFRGNSLATKSMEAYLKLVGDQYLQDTLGEAVLSAAGPGAPECEVDPLRAGSGAALRRHQAALRDTVSLAWSAIASSATRFPPPLRDCFATFRERLASMGREDISDNLISASIFLRFLCPAILSPSLFGIIHEYPNERAARNLTLVAKTLQTLANFTRFQGKEAFMEFLNDFLEQEAPNMKAFLRAISTRPQEQQQHQTSQQQQQHQSSQQQQQQSNQSDSKRNSSTSHSSVEGEVDPDPEWAPHVDLGKQLATLHSLLVDSLPKLCAAKIQELDPLSDILDELSKRLLSNDNGPIPQIGDNIFRFNDPTCNAQTKQNNETSTNGPLTNNFAHSSPIMNKNGVQFNISPSKSNAEDSKYKGSFATVSKSPSFNLRSATLPRNGYGTNQVNQNVNPDRYSSQYNNQEHCVNLKVVQIGFGSDQYPKGISNSVNENERRFQDRYKPNNFNQGHFHNTNYNSTERSPSSDSINHNYCSNDMQNIMKETATLDELSDLLKYADDSDIVDEKMMNKKNISQSKTNNNNIINGNKNSYTNNGSNVSISGLSNVASSGYQSIATYSQSSSPIENATHLHQAYENGGQPMSRYSQLNYQKQRDKQYYENKNEKFYPKSPVQQKIEYDIQKYGIQNFTTADNVQNNTNANTKVAPLVFTNPVYNMEDNRQSQDVKKPNENRNSKRCPCGSSSSSIDEEGLSTDNVETNSEEGSTNFNDDRNFDKQNRNATHRKLTRDNCNYEDVYQRTTNHSSSPRIRDDESSSNSPSLRKASKTRMPRTNPMLSYSTNQNQLNLKHFGQRGESLYESKPHHISTDSGYPMSRSDSNVEEVNKEMYRLQISRSQKALYNMENSKNSPEKFIAENSIPETNYPLDRTYSGAKISSSRLNEDLERHQDYYGVRERRESPSRGFNRESHSSEASERVPVRVDREAPVRDKLQRRLSLESARELTDSSSEVDDTFYSTTGRKRANKHHRTIEQYEREIERLKCSVELLRGRLGPTDSGQDQTDAKMKAIISRLICVEEELRREQRKMAAALSHKQRVIEAQEHRIAALDEANTRLLSALVHLQQRAPHPPSHNNNHSTSHSPHSQHSHQELQI-