Monarch geneset OGS2.0

DPOGS213139
TranscriptDPOGS213139-TA6063 bp
ProteinDPOGS213139-PA2020 aa
Genomic positionDPSCF300016 + 933238-957758
RNAseq coverage99x (Rank: top 61%)
Annotation
HeliconiusHMEL0103520.084.43% 
BombyxBGIBMGA007897-TA0.080.45% 
Drosophilacac-PN0.066.61% 
EBI UniRef50UniRef50_P916450.066.61%Voltage-dependent calcium channel type A subunit alpha-1 n=71 Tax=Bilateria RepID=CAC1A_DROME
NCBI RefSeqXP_312358.40.065.91%AGAP002578-PA [Anopheles gambiae str. PEST]
NCBI nr blastpgi|2586744790.083.18%cacophony, partial [Bombyx mori]
NCBI nr blastxgi|3504161620.064.54%PREDICTED: voltage-dependent calcium channel type A subunit alpha-1-like [Bombus impatiens]
Group
Gene OntologyGO:00160201.3e-56membrane
GO:00550851.3e-56transmembrane transport
GO:00052161.3e-56ion channel activity
GO:00068111.3e-56ion transport
GO:00519251.4e-54regulation of calcium ion transport via voltage-gated calcium channel activity
GO:00052451.4e-54voltage-gated calcium channel activity
GO:00068161.4e-54calcium ion transport
GO:00058911.4e-54voltage-gated calcium channel complex
KEGG pathwayspu:5781280.0 
 K05315 (CACNA1N)maps-> MAPK signaling pathway
InterPro domain[1258-1474] IPR0058211.3e-56Ion transport
[249-264] IPR0020771.4e-54Voltage-dependent calcium channel, alpha-1 subunit
Orthology groupMCL10068 Multiple-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS213139-TA
ATGCGATTCCCATTCAGTGTCGATCACTCGACCTCCTTTCTCAACCTCGGTAAAACCCATTGCGAGGTTGTTCGTCTTCAGAACTGCATTAAATGCGACCTTCGAGTGGCCATCGACAGGTTGGCGGCAGCGCAGGAGGCGGCGGGCGCGCAGGCTCGCGCGGCGCCAGCTGATACCATGGGCGGCGCGCACCAGCCCGCTACTCCGGGGCCCAGTTCGCTCTTTATATTCTCCGACGAAAATCCTATACGGAGGTATACAAAGTTTATCATCGAGTGGCCGCCCTTCGAGTACGCGGTGCTGCTTACCATCATCGCCAACTGCGTGGTGCTGGCGCTGGAGGAGCATCTGCCTAACGGCGATAAGACCATCTTAGCACAGAATCTGGAAAAGACCGAGGCGTACTTTTTAGGAATATTTTGTGTAGAAGCCTCGTTAAAAATCTTAGCCTTAGGTTTTGTTTTACACAGGGGTTCTTATCTTAGAAACGTTTGGAACATAATGGATTTTTTCGTTGTATTGACCGGGTCGATGACGATTTTCGCCGAATACAACGTGGACGTTGACCTGCGGATGCTGCGCTCGTTCAGAGTGCTACGACCGCTCAAGCTCGTCTCGCGGATACCAAGTAATTCACATATCATCACGCAGCTGCCAATCGCGCCCACCGAAGTCGACTTCCGGACCTTGCGTGCCATTAGGGTGCTGAGGCCCCTTAAATTAGTATCGGGCGTTCCTAGTTTGCAAGTGGTGTTGAAGTCGATTATTAAGGCGATGGCTCCGTTGCTGCAGATCGGCCTTTTGGTGCTTTTTGCGATCGTCATTTTCGCTATTATAGGCCTCGAGTTTTATTCCGGGGCGCTACATAAGACTTGTTATAATTTAGAAGATATTACTGAAATAGTTAACGATGGTGATAATCCGACGCCGTGCAATGCGGACAACGAAACGCTAGCTCCGTACGGGGCGCATGTGTGCACATATGATAAGAGCACGTGCCTGGAAAAGTGGGAAGGGCCGAATAGAGGGATCACTTCGTTTGACAACATCGGCTTTGCTATGCTCACTGTCTTCCAGTGCATCACTATGGAGGGATGGACGGCCATTCTATATTGGACAAACGACGCGTTAGGTAGCACATTTAACTGGATTTACTTTGTGCCTCTCATAGTATTGGGTTCATTCTTTATGCTCAACTTGGTTCTCGGTGTTCTTAGCGGAGAATTTTCCAATGAAAGAGGCCGCGTAGAGCGTAGGGCTCAATTTCAAAAGGAAAGAGCGCGGCAGGCCTTTAATTCGGATTTTACCGGTTATATTAACTGGATAACTGAGGCAGGTCTGTTTGAGTTCGCTAAAGAAAGAGAGAAAGTAGAAAATAGGCAAGAATTTCTTAAAATAAGAAGACAACAGATACTAGAGAGAGAACTCAATGGTTATGTAGAGTGGATATGTAAAGCTGAGGAAGTTATATTAGCTGAAGAAAGAACAACAGAGGAAGAGAGAATGCATATAATAGAAGCTCGAAGAAGAGCCGCAGCGAAGAAGAAATTAAAAAACCTTGGGAAAAGTAAAAGCACGGATACTGAAGAAGAAGAACAGGACGAGGAATGCGGTGATGATGGTTTTTTGAAAAGTAAAACACGTTCGGCTGGAAAATGCGCAGACTTCTGGAGAGCAGAAAAGAGGTTTCGTTTTTGGATTAGGCATACAGTGAAAACACAATGGTTTTATTGGTTCGTCATCGTACTGGTGCTTTTCAATACTATATGTGTAGCAGTTGAGCATTACAGACAACCTAAGTGGCTTACTTCATTTTTATATTATGCCGAATTTGTATTCTTGGGTTTATTCATGATGGAAATGTGGGTGAAAATGTATGCCCTCGGGCCGCGAATTTACTTCGAGTCCTCATTTAACCGCTTCGATTGTGTCGTCATATCTGGCTCCATATTTGAAGTTGTGTGGTCAGAAGTAAAGGGTGGCTCTTTCGGTCTCTCGGTCCTCAGGGCCTTGAGATTATTGAGGATATTTAAGGTCACAAAATATTGGTCGTCGTTACGCAATCTTGTGATATCTCTTCTTAATTCAATGAGATCTATTATCTCATTGCTATTTCTTCTATTCTTGTTCATACTTATCTTTGCTCTTCTCGGGATGCAATTATTTGGTGGACAGTTTAATTTCGAAGAAGGCACACCGCCAACAAACTTCAATACGTTTCCAATCGCGCTACTTACAGTCTTCCAGATTTTAACAGGCGAGGATTGGAATGAAGTTATGTACTATGGCATTCAATCTCAGGGTGGCATACAAAGGGGCATGATCTACTCGCTGTATTTTGTGATTCTTGTGTTGTTCGGAAACTACACATTGCTAAACGTGTTTCTTGCCATCGCCGTCGACAATCTGGCTAACGCTCAGGAATTAACAGCGGCTGAAGAAGAACAGGGGGAAGAAAATAAGGAAGCTGAGATACCAGATGGACCAAAACCAATGCTGCCATATTCGTCCATGTTTGTTTTGTCACCTACTAATCCCATTAGACGAGGCGCACACTGGATTGTAAATTTAAGATATTTTGATTTTTTTATTATGGTAGTTATTTGCATGAGTTCCGTGGCTTTAGCGGCTGAAGACCCCGTAGTTGAAGAAAGTAACCGAAATAAGGTGCTAAACTACTTCGACTACGCGTTCACTGGGGTCTTCACTGTGGAGATGCTGCTGAAGATTGTCGACCTCGGCATCTTGTTCCACCCGGGCGCGTATTTACGAGACCTGTGGAACATCATGGACGCCGCGGTCGTTATATGCGCCCTTGTTAGCTTCGGTTTTGAAATCGGAGGCGTGAAGAAGGGCGCCGGGCAAAATTTGTCCACAATAAAGTCGTTACGAGTGTTAAGAGTGCTCAGACCTTTAAAAACTATAAAACGTGTTCCAAAATTAAAAGCAGTGTTTGACTGTGTTGTGAACTCGTTGAAAAATGTCATTAACATTCTCATTGTGTACATATTGTTTCAATTCATATTCGCTGTAATAGCAGTGCAACTTTTTAATGGTAAATTTTTTCACTGCAGTGATATTAGTAAAAATACTTTTGAAGACTGCCAAGGGTCGTTTTTCGTTTACGAATCCAATAGTCTATTGCCGCAAGTAAGAAAGCGGCAGTGGACGACACAATCCTTCCATTACGATAACGTGGCCTCCGCTATGCTAACGCTGTTCGCGGTACAGACAGGAGAAGGCTGGCCACAGGTGTTGCAGAATTCAATGGCAGCAACGTACGAAGACAGGGGACCCATACAAAATTTTCGAATAGAAATGTCCATCTTTTATATAGTTTACTTTGTGGTGTTCCCATTTTTCTTTGTTAACATATTCGTAGCTCTGATTATTATCACCTTTCAAGAGCAGGGCGAAGCTGAGTTGCAGGACGGTGAAATTGATAAAAATCAGAAATCGTGTATAGACTTTACGATAGAAGCACGACCTTTAGAGAGGTATATGCCAAGTAAGAGGGGGAGTCTTAAGTACAAAGTGTGGAGAATAGTAGTCTCTACGCCATTTGAGTATTTCATCATGGCGCTTATTGTGCTAAACACTTTGTTGCTCATGATGAAGTACTATAATCAAAATGACCTCTACGCGGATATCCTCAAGTATTCGAATATGGGGTTTACTGGAATGTTTTCTGTGGAAACGGTGTTGAAAATCATCGCATATGGTGTCAAATTTCACGAGGCTCCACCACTTCTCATGGATGTCTTAACGGTCATGAACATAGTCTTTACGTTCTTCTTTCTTCTCGAGACCGTTTTGAAGTTAATTGCCTTCGGATGTACGAATTTTTTCAAAGACCCTTGGAACACGTTTGATTTTATAACGGTCATTGGAAGTATTATTGACGCTCTCATTATGGAGTTTGGCAGTGACCTCGCCGAAAACTGTGCTGACATATCCTGTCAGCAGGAGAACACATTCAACGTTGGTTTCCTCCGCCTCTTTCGAGCCGCGCGACTGATCAAGCTGCTTCGACAGGGCTACACTATTCGAATACTACTTTGGACGTTCGTGCAGAGTTTCAAAGCCTTACCCTACGTGTGCCTTCTCATCGCAATGCTGTTCTTTATTTACGCTATTATTGGAATGCAGGTGTTCGGAAACATAGAATTAGCAGCCGATTCTGATATGAACAGGCATAACAATTTTCGGAGCTTCATACAAGCGCTTATGTTATTATTTAGGTGTGCAACAGGTGAATCTTGGCCAAACATTATGTTGGCTTGTCTCAAGCCCGCAAAGTGTGACAGGGAAGCCGACAAACCACCAAATGAAGCCTGCGGAAGCACACTGGCTTACGCATATTTCGTGTCTTTTATTTTTTTTTGCTCGTTTCTTATGTTGAATTTGTTCGTAGCTGTCATTATGGACAATTTTGACTATTTGACAAGAGATTCCTCCATTTTAGGCGCACATCACTTAGATGAATTCGTTCGAATATGGGCGGAATACGATCCAAACGCAACGGGAAAAATACATTATACAGAAATGTATGACATGTTAAAAAATATGGATCCACCTCTGGGTTTCGGTAACAAATGTCCAAATAGACTGGCATTTAAGAAGCTAATAAGAATGAACATGCCGTTAGATGAAGAGGGAAAAGTTAATTTTACAACAACACTATTCGCCTTAATTCGGGAAAATCTTAGCATTAAAATGAGATCTGCCGAAGAAATGGACCAAGCCGACGAAGAACTTAGGGAAACAATAACTCACATCTGGCCGCTTCAAGCTAAGAAGATGTTAGACTTGCTGGTGCCTCGCAAAGATGTTCTCAACGCTGGGAAATTGACTGTCGGAAAAATTTACGCAGGACTTCTTATTTTAGAGAGCTGGAGAACGACTGGGTTTAAAAAGCAGGGCGTTCCGGCATTCAGCGAGAATAGCCCTACGGCCAATCAGCCGAAGGCGACCTTGTTTGACTGTCTGATGGATGCGGCGGCTGCGGCTCATGGCCATGGCTCTAGGACCGGGTCTTTGACCCATGAGATTCCAGTTAGCGGTACAGACGGCCATCCGGAAGACCCACATATGTTGGCGAACCTCGCGAAACGCTCTACAAGAAAATCGCTTAAGAACAACAAAAAGGTCTTGGAGTTGCAAGATGTGGGATCTCATCATGCGTCCGTGGAATCACTAGATGAAGCCAGGTTACAAGCTCCTCACGTTTATCAGAATGGACACGGAAGGTCATCTAGTTTGAGACGATCTCCGAGTCCAAGAAGACGCGGACACTACGGAGGGTACCATCATGAAATCGGCTTCTCCGATACAGTTAATAATGTCGTCGAGATAGTAAAACACGAACATCATAGACATGGTCGAACGCACAGAGCGGCACATCACTATCATCCACATGGTAAGTACACATCCGAATTGATAAAGCGTGGTGGAAGGTACATGAAGGTATTCCTGACAGCAGGGAAGGAGTGGAGAGCGCCGTATCCCACGACCAGCCTGAGCCAGCCCTCGCGATCGCCCAGCCCGCCACAAAACACCTACGGTGGTGATCGTGAGCGCGAGCGCGATCGAGAACGAGAATGGCGAGAGTGGCGTGAAGGAGGCAGGCGAGGCCGAGGCCGGCAGCTGCCGCCGACGCCGACGAAGCCGTCCACGTTGCATGTTAAACAACAGCCACCGTTCGCCAGAATAAGCCACAGCCCCTCGCACTTATCGTTGAGGCATACGGCCAGAGAGCCTTTAGAGCCTCTTCACGACGAGTACGAGTACGGCCGAGAAGTTGAAAGACTGATACACCGAGACTATAGATCTAGAGAAAGTCTCAATGAAACCGGGCGTGAGTTCGGCAGGCGCGGATGGGGTTATGAATCGGAGCGAGGCGGACGATCGTATGAGGCGCCGCTGAGCTACGAAGCGGCGCTGGCGCTGGGGCGGGGTGGAGGGGCGCGTGCCCTGCCGTCGCCCGGGCCGGCACCCCGGCTGCCTAACGGATACAAGCCGCGAGTCCGGCACTCCGACTCGGACGAGGACGACTGGTGCTAG

Protein sequence:

>DPOGS213139-PA
MRFPFSVDHSTSFLNLGKTHCEVVRLQNCIKCDLRVAIDRLAAAQEAAGAQARAAPADTMGGAHQPATPGPSSLFIFSDENPIRRYTKFIIEWPPFEYAVLLTIIANCVVLALEEHLPNGDKTILAQNLEKTEAYFLGIFCVEASLKILALGFVLHRGSYLRNVWNIMDFFVVLTGSMTIFAEYNVDVDLRMLRSFRVLRPLKLVSRIPSNSHIITQLPIAPTEVDFRTLRAIRVLRPLKLVSGVPSLQVVLKSIIKAMAPLLQIGLLVLFAIVIFAIIGLEFYSGALHKTCYNLEDITEIVNDGDNPTPCNADNETLAPYGAHVCTYDKSTCLEKWEGPNRGITSFDNIGFAMLTVFQCITMEGWTAILYWTNDALGSTFNWIYFVPLIVLGSFFMLNLVLGVLSGEFSNERGRVERRAQFQKERARQAFNSDFTGYINWITEAGLFEFAKEREKVENRQEFLKIRRQQILERELNGYVEWICKAEEVILAEERTTEEERMHIIEARRRAAAKKKLKNLGKSKSTDTEEEEQDEECGDDGFLKSKTRSAGKCADFWRAEKRFRFWIRHTVKTQWFYWFVIVLVLFNTICVAVEHYRQPKWLTSFLYYAEFVFLGLFMMEMWVKMYALGPRIYFESSFNRFDCVVISGSIFEVVWSEVKGGSFGLSVLRALRLLRIFKVTKYWSSLRNLVISLLNSMRSIISLLFLLFLFILIFALLGMQLFGGQFNFEEGTPPTNFNTFPIALLTVFQILTGEDWNEVMYYGIQSQGGIQRGMIYSLYFVILVLFGNYTLLNVFLAIAVDNLANAQELTAAEEEQGEENKEAEIPDGPKPMLPYSSMFVLSPTNPIRRGAHWIVNLRYFDFFIMVVICMSSVALAAEDPVVEESNRNKVLNYFDYAFTGVFTVEMLLKIVDLGILFHPGAYLRDLWNIMDAAVVICALVSFGFEIGGVKKGAGQNLSTIKSLRVLRVLRPLKTIKRVPKLKAVFDCVVNSLKNVINILIVYILFQFIFAVIAVQLFNGKFFHCSDISKNTFEDCQGSFFVYESNSLLPQVRKRQWTTQSFHYDNVASAMLTLFAVQTGEGWPQVLQNSMAATYEDRGPIQNFRIEMSIFYIVYFVVFPFFFVNIFVALIIITFQEQGEAELQDGEIDKNQKSCIDFTIEARPLERYMPSKRGSLKYKVWRIVVSTPFEYFIMALIVLNTLLLMMKYYNQNDLYADILKYSNMGFTGMFSVETVLKIIAYGVKFHEAPPLLMDVLTVMNIVFTFFFLLETVLKLIAFGCTNFFKDPWNTFDFITVIGSIIDALIMEFGSDLAENCADISCQQENTFNVGFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIELAADSDMNRHNNFRSFIQALMLLFRCATGESWPNIMLACLKPAKCDREADKPPNEACGSTLAYAYFVSFIFFCSFLMLNLFVAVIMDNFDYLTRDSSILGAHHLDEFVRIWAEYDPNATGKIHYTEMYDMLKNMDPPLGFGNKCPNRLAFKKLIRMNMPLDEEGKVNFTTTLFALIRENLSIKMRSAEEMDQADEELRETITHIWPLQAKKMLDLLVPRKDVLNAGKLTVGKIYAGLLILESWRTTGFKKQGVPAFSENSPTANQPKATLFDCLMDAAAAAHGHGSRTGSLTHEIPVSGTDGHPEDPHMLANLAKRSTRKSLKNNKKVLELQDVGSHHASVESLDEARLQAPHVYQNGHGRSSSLRRSPSPRRRGHYGGYHHEIGFSDTVNNVVEIVKHEHHRHGRTHRAAHHYHPHGKYTSELIKRGGRYMKVFLTAGKEWRAPYPTTSLSQPSRSPSPPQNTYGGDRERERDREREWREWREGGRRGRGRQLPPTPTKPSTLHVKQQPPFARISHSPSHLSLRHTAREPLEPLHDEYEYGREVERLIHRDYRSRESLNETGREFGRRGWGYESERGGRSYEAPLSYEAALALGRGGGARALPSPGPAPRLPNGYKPRVRHSDSDEDDWC-