DPOGS213256 | ||
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Transcript | DPOGS213256-TA | 564 bp |
Protein | DPOGS213256-PA | 187 aa |
Genomic position | DPSCF300124 + 369275-369838 | |
RNAseq coverage | 59x (Rank: top 68%) |
Annotation | ||||
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Heliconius | HMEL012581 | 1e-81 | 72.19% |   |
Bombyx | BGIBMGA009447-TA | 5e-71 | 65.24% |   |
Drosophila | CG3819-PA | 2e-44 | 42.31% |   |
EBI UniRef50 | UniRef50_Q08JX1 | 5e-55 | 52.15% | Alkaline nuclease n=5 Tax=Obtectomera RepID=Q08JX1_BOMMO |
NCBI RefSeq | NP_001091744.1 | 1e-55 | 52.15% | alkaline nuclease [Bombyx mori] |
NCBI nr blastp | gi|327420470 | 1e-56 | 53.76% | dsRNase [Mamestra configurata] |
NCBI nr blastx | gi|327420470 | 8e-57 | 53.76% | dsRNase [Mamestra configurata] |
Group | ||||
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Gene Ontology | GO:0046872 | 2.7e-32 | metal ion binding | |
GO:0016787 | 2.7e-32 | hydrolase activity | ||
GO:0003676 | 2.7e-32 | nucleic acid binding | ||
KEGG pathway |   | |||
InterPro domain | [6-173] IPR020821 | 2.7e-32 | Extracellular Endonuclease, subunit A | |
[5-169] IPR001604 | 7.4e-32 | DNA/RNA non-specific endonuclease | ||
Orthology group | MCL30657 |   | Lepidoptera specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS213256-TA
ATGACGCCATCTCAAGAGTTATCTAGAGGACATTTAGCTGCTAAAACAGACTTCGTCTTCGCTTTCGGAGAACGTGCTACCTTCCACTATGTGAATTGCGCTCCGCAATGGAAAAATTTCAATGGTGGAAACTGGAATACTCTAGAAGTTGATCTGAGGAATCACATACACGCAGCTGGATACAATACAATAATATACACCGGAACCTATGGAGTAACTCAACTCTTGAATCAAGTCGGTTACTGGACAGACTTGCACCTATACACAGACGAGAACAATAATCCTGTTATACCAATACCTCAATATTTTTATAAAGTCGTCTACGAGCCGAGTAGTAAAAACGGCATTGCATTCGTCGGTATCAACAATCCACACTATACAGCCGAAAAGGTAAAAGAATTGATTTTCTGCGACGACGTTTGTAAAGAAAAACCAGAATTTAGATGGTTGACTTGGCATCCGAACAATCCGAACGAAGGTTACACTTTCTGCTGTTCTATACCAGATTTTAGACGAGCTATATCCCACTTACCTGATTTTGAAGTGGATGGTATTCTAATATGA
>DPOGS213256-PA
MTPSQELSRGHLAAKTDFVFAFGERATFHYVNCAPQWKNFNGGNWNTLEVDLRNHIHAAGYNTIIYTGTYGVTQLLNQVGYWTDLHLYTDENNNPVIPIPQYFYKVVYEPSSKNGIAFVGINNPHYTAEKVKELIFCDDVCKEKPEFRWLTWHPNNPNEGYTFCCSIPDFRRAISHLPDFEVDGILI-