| DPOGS213384 | ||
|---|---|---|
| Transcript | DPOGS213384-TA | 372 bp |
| Protein | DPOGS213384-PA | 123 aa |
| Genomic position | DPSCF300109 + 297051-298097 | |
| RNAseq coverage | 24055x (Rank: top 0%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL016373 | 7e-54 | 85.25% | |
| Bombyx | BGIBMGA009130-TA | 1e-66 | 98.37% | |
| Drosophila | RpS20-PA | 1e-53 | 83.74% | |
| EBI UniRef50 | UniRef50_E9IDH6 | 9e-54 | 90.99% | Putative uncharacterized protein (Fragment) n=6 Tax=Opisthokonta RepID=E9IDH6_SOLIN |
| NCBI RefSeq | NP_001091809.1 | 3e-65 | 98.37% | ribosomal protein S20 [Bombyx mori] |
| NCBI nr blastp | gi|315115379 | 4e-64 | 99.19% | ribosomal protein S20 [Euphydryas aurinia] |
| NCBI nr blastx | gi|315115379 | 2e-62 | 99.19% | ribosomal protein S20 [Euphydryas aurinia] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005840 | 2.3e-78 | ribosome | |
| GO:0006412 | 2.3e-78 | translation | ||
| GO:0005622 | 2.3e-78 | intracellular | ||
| GO:0003735 | 2.3e-78 | structural constituent of ribosome | ||
| GO:0015935 | 4.6e-45 | small ribosomal subunit | ||
| KEGG pathway | cqu:CpipJ_CPIJ006764 | 7e-57 | ||
| K02969 (RP-S20e, RPS20) | maps-> | Ribosome | ||
| InterPro domain | [1-123] IPR001848 | 2.3e-78 | Ribosomal protein S10 | |
| [22-120] IPR005729 | 4.6e-45 | Ribosomal protein S10, eukaryotic/archaeal | ||
| Orthology group | MCL13860 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS213384-TA
ATGGCAGCCGCTGTCGTGTCAGGCAAGGACATTGAGAAGCCTCAGGCTGAGGTATCTCCCATCCATCGTATCCGCATCACGTTAACCTCTCGTAACGTGCGCTCGCTCGAGAAGGTCTGCTCGGACCTTATCAATGGCGCTAAGAAGCAAAAGCTTCGTGTCAAGGGTCCAGTGCGTATGCCGACCAAAGTTCTCCGCATCACAACCCGTAAAACACCTTGCGGTGAAGGTTCCAAGACCTGGGACAGATTCCAGATGAGGATCCACAAGAGGGTCATCGACCTTCACTCTCCATCGGAGATAGTGAAGCAGATCACCTCCATCAACATCGAGCCCGGTGTGGAGGTGGAAGTGACCATCGCTGATGCTTAA
>DPOGS213384-PA
MAAAVVSGKDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCSDLINGAKKQKLRVKGPVRMPTKVLRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIADA-