DPOGS213389 | ||
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Transcript | DPOGS213389-TA | 777 bp |
Protein | DPOGS213389-PA | 258 aa |
Genomic position | DPSCF300109 + 363041-365337 | |
RNAseq coverage | 311x (Rank: top 36%) |
Annotation | ||||
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Heliconius | HMEL016362 | 1e-34 | 57.55% |   |
Bombyx | BGIBMGA009153-TA | 2e-67 | 50.17% |   |
Drosophila | ATPsyn-beta-PA | 2e-28 | 88.24% |   |
EBI UniRef50 | UniRef50_Q05825 | 2e-26 | 88.24% | ATP synthase subunit beta, mitochondrial n=3850 Tax=root RepID=ATPB_DROME |
NCBI RefSeq | XP_001847944.1 | 2e-27 | 85.71% | ATP synthase beta subunit [Culex quinquefasciatus] |
NCBI nr blastp | gi|170040305 | 3e-26 | 85.71% | ATP synthase beta subunit [Culex quinquefasciatus] |
NCBI nr blastx | gi|170040305 | 6e-25 | 85.71% | ATP synthase beta subunit [Culex quinquefasciatus] |
Group | ||||
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Gene Ontology | GO:0005524 | 5.9e-10 | ATP binding | |
KEGG pathway | cqu:CpipJ_CPIJ006209 | 5e-27 |   | |
  | K02133 (ATPeF1B, ATP5B) | maps-> | Huntington's disease | |
  |   |   | Oxidative phosphorylation | |
  |   |   | Alzheimer's disease | |
  |   |   | Parkinson's disease | |
InterPro domain | [112-171] IPR000194 | 5.9e-10 | ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain | |
Orthology group | MCL24731 |   | Lepidoptera specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS213389-TA
ATGCCACGTACCAAGCGACCCACACGAAATGTTGAAAAAACTGGTGAAGATGATGACGCTTTGAAAAAGTTAAATAAACAAGTAATTGATCTCAAAAATAAAGTAGACTCCCGAGCAAACATGGAGCTTCGAAACGTTGAACTTGCTTTCAAAATACTATTAGGTTCTATCAGCGCCAATCTCTTACAGAAAACTGTGGGACAGTTGAAGACAGAATTGCATTTCAAAGATACAACTACACATTCGAGTAGATCGGCCTCTCATGACGATGGGTACCTCACGGAGAATTCATCTCAAGGTTCTGGAGAGCGACATGCTAAGAAAACATTCCTTGGTGGCAAAATCGGTCTATTCGGTGGCGCTGGCGTCGGGAAAACGGTTCTGATCATGGAACTCATCAATAACGTAGCCAAGGCCCACGGTGGATTTTCGGTTTTCGCCGGGGTCGGTGAACGAACCCGTGAAGGCAATGATCTCTACAACGAGATGAAAGTCGGCGGTGTCATAAAAGAAGATTACAAAACATCAAAAGTATGTAACTTAATGCAGTACGATTCAGTGACTTTGAAGTACTTTATGCAGCCGTCTGAGAAGGCGACCTGCAACATCCTGCTTCGTGACGGCACCACTTTGTCTCTGCAGCCCAAGCAGCTGAGACAGTCGCAGGCCTACATACCCTTCACATTGATGGACTCACGTGTACTGGACCAGCTGAGAACACTGAAAGATAACTTGGATAAAGTAGTGAAGCTCGGGGAGAAGGTGATAGTGCAGTAG
>DPOGS213389-PA
MPRTKRPTRNVEKTGEDDDALKKLNKQVIDLKNKVDSRANMELRNVELAFKILLGSISANLLQKTVGQLKTELHFKDTTTHSSRSASHDDGYLTENSSQGSGERHAKKTFLGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYNEMKVGGVIKEDYKTSKVCNLMQYDSVTLKYFMQPSEKATCNILLRDGTTLSLQPKQLRQSQAYIPFTLMDSRVLDQLRTLKDNLDKVVKLGEKVIVQ-