| DPOGS213492 | ||
|---|---|---|
| Transcript | DPOGS213492-TA | 420 bp |
| Protein | DPOGS213492-PA | 139 aa |
| Genomic position | DPSCF300100 + 301371-303709 | |
| RNAseq coverage | 25505x (Rank: top 0%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL016838 | 6e-62 | 99.11% | |
| Bombyx | BGIBMGA004374-TA | 7e-73 | 94.96% | |
| Drosophila | RpS12-PB | 3e-55 | 72.66% | |
| EBI UniRef50 | UniRef50_P80455 | 3e-53 | 72.66% | 40S ribosomal protein S12 n=51 Tax=Eukaryota RepID=RS12_DROME |
| NCBI RefSeq | NP_001037568.1 | 2e-71 | 94.96% | ribosomal protein S12 [Bombyx mori] |
| NCBI nr blastp | gi|342356383 | 4e-73 | 98.56% | ribosomal protein S12 [Heliconius melpomene cythera] |
| NCBI nr blastx | gi|342356383 | 2e-73 | 98.56% | ribosomal protein S12 [Heliconius melpomene cythera] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005840 | 1.5e-89 | ribosome | |
| GO:0006412 | 1.5e-89 | translation | ||
| GO:0005622 | 1.5e-89 | intracellular | ||
| GO:0003735 | 1.5e-89 | structural constituent of ribosome | ||
| KEGG pathway | tca:661058 | 4e-58 | ||
| K02951 (RP-S12e, RPS12) | maps-> | Ribosome | ||
| InterPro domain | [2-139] IPR000530 | 1.5e-89 | Ribosomal protein S12e | |
| [24-117] IPR004038 | 1.8e-30 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 | ||
| Orthology group | MCL12180 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS213492-TA
ATGGCCGATGTTGATGTTGAGGTTCCGAACAACCCCGTCCTGAGCGGAGGTGCTATGGATGTAAACACAGCCCTACAGGAAGTGCTCAAGACAGCTCTCATCCACGGGGGTCTGGTTCATGGTCTACACGAGGCCGCTAAGGCTTTAGACAAGAGACAAGCTGTTCTCTGTGTCCTAGCTGAGAATTGTGATGAGGCTGCTTACAAGAAATTGGTACAAGCCCTCTGTAATGAACATCAGATACCCCTTGTTAAGGTCGACAACAACAAGAAACTCGGTGAGTGGGCCGGTTTATGCAAAATTGACAAGGACGGCAAAGCAAGGAAAATCGTCGGTTGCTCTTGCGTTGTTATAACAGACTTTGGTGAAGAGACGCCAGCGTTGGATGTTCTCAAGGACTACCTGAAATCTTCAAGCTAA
>DPOGS213492-PA
MADVDVEVPNNPVLSGGAMDVNTALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVITDFGEETPALDVLKDYLKSSS-