DPOGS213492 | ||
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Transcript | DPOGS213492-TA | 420 bp |
Protein | DPOGS213492-PA | 139 aa |
Genomic position | DPSCF300100 + 301371-303709 | |
RNAseq coverage | 25505x (Rank: top 0%) |
Annotation | ||||
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Heliconius | HMEL016838 | 6e-62 | 99.11% |   |
Bombyx | BGIBMGA004374-TA | 7e-73 | 94.96% |   |
Drosophila | RpS12-PB | 3e-55 | 72.66% |   |
EBI UniRef50 | UniRef50_P80455 | 3e-53 | 72.66% | 40S ribosomal protein S12 n=51 Tax=Eukaryota RepID=RS12_DROME |
NCBI RefSeq | NP_001037568.1 | 2e-71 | 94.96% | ribosomal protein S12 [Bombyx mori] |
NCBI nr blastp | gi|342356383 | 4e-73 | 98.56% | ribosomal protein S12 [Heliconius melpomene cythera] |
NCBI nr blastx | gi|342356383 | 2e-73 | 98.56% | ribosomal protein S12 [Heliconius melpomene cythera] |
Group | ||||
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Gene Ontology | GO:0005840 | 1.5e-89 | ribosome | |
GO:0006412 | 1.5e-89 | translation | ||
GO:0005622 | 1.5e-89 | intracellular | ||
GO:0003735 | 1.5e-89 | structural constituent of ribosome | ||
KEGG pathway | tca:661058 | 4e-58 |   | |
  | K02951 (RP-S12e, RPS12) | maps-> | Ribosome | |
InterPro domain | [2-139] IPR000530 | 1.5e-89 | Ribosomal protein S12e | |
[24-117] IPR004038 | 1.8e-30 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 | ||
Orthology group | MCL12180 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS213492-TA
ATGGCCGATGTTGATGTTGAGGTTCCGAACAACCCCGTCCTGAGCGGAGGTGCTATGGATGTAAACACAGCCCTACAGGAAGTGCTCAAGACAGCTCTCATCCACGGGGGTCTGGTTCATGGTCTACACGAGGCCGCTAAGGCTTTAGACAAGAGACAAGCTGTTCTCTGTGTCCTAGCTGAGAATTGTGATGAGGCTGCTTACAAGAAATTGGTACAAGCCCTCTGTAATGAACATCAGATACCCCTTGTTAAGGTCGACAACAACAAGAAACTCGGTGAGTGGGCCGGTTTATGCAAAATTGACAAGGACGGCAAAGCAAGGAAAATCGTCGGTTGCTCTTGCGTTGTTATAACAGACTTTGGTGAAGAGACGCCAGCGTTGGATGTTCTCAAGGACTACCTGAAATCTTCAAGCTAA
>DPOGS213492-PA
MADVDVEVPNNPVLSGGAMDVNTALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVITDFGEETPALDVLKDYLKSSS-