DPOGS213519 | ||
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Transcript | DPOGS213519-TA | 840 bp |
Protein | DPOGS213519-PA | 279 aa |
Genomic position | DPSCF300033 - 865007-866088 | |
RNAseq coverage | 257x (Rank: top 41%) |
Annotation | ||||
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Heliconius | HMEL013689 | 3e-128 | 76.98% |   |
Bombyx | BGIBMGA011799-TA | 1e-99 | 69.60% |   |
Drosophila | CG32250-PB | 1e-72 | 48.48% |   |
EBI UniRef50 | UniRef50_O43808 | 3e-68 | 48.68% | Peroxisomal membrane protein PMP34 n=58 Tax=Chordata RepID=PM34_HUMAN |
NCBI RefSeq | XP_002423193.1 | 1e-76 | 48.98% | Peroxisomal membrane protein PMP34, putative [Pediculus humanus corporis] |
NCBI nr blastp | gi|242004650 | 2e-75 | 48.98% | Peroxisomal membrane protein PMP34, putative [Pediculus humanus corporis] |
NCBI nr blastx | gi|242004650 | 2e-72 | 48.98% | Peroxisomal membrane protein PMP34, putative [Pediculus humanus corporis] |
Group | ||||
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Gene Ontology | GO:0006810 | 4e-05 | transport | |
GO:0055085 | 4e-05 | transmembrane transport | ||
GO:0005743 | 4e-05 | mitochondrial inner membrane | ||
GO:0005488 | 4e-05 | binding | ||
KEGG pathway | phu:Phum_PHUM042180 | 3e-76 |   | |
  | K13354 (SLC25A17, PMP34) | maps-> | Peroxisome | |
InterPro domain | [9-267] IPR023395 | 1.5e-58 | Mitochondrial carrier domain | |
[99-184] IPR018108 | 6e-21 | Mitochondrial substrate/solute carrier | ||
Orthology group | MCL12678 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS213519-TA
ATGACTTCATCATTATTAAGTTACGAGACGCTCACTCATGCGATAGCAGGAGCTACGGGCAGTGTGGTCGGAATGGCTGCTTTTTATCCTTTGGATACGATTCGGTCGAGGTTACAAGTTGATGACACTAAAAAACTTCATGGGACTACCTTAGAACTACTTATTAAATTGACCAAAGAAGAAGGAATCGAAGCTCTTTACCATGGACTAGGTCCTGTTTTACAATCACTATCAGTGTCCAATTTTGTTTATTTTTATGTATTCCATTCCTTACGTAGAGTCAGTTCAGCATCTCCTTCAGCTGCAAGGGATCTTTTAATTGGAATGGTTGCTGGTAGTGTTAATGTACTTCTTACATCACCCCTGTGGGTTGTTAATACAAGGATGAAGTTAGAAAAAAATTCATATTCTAGTTTATTTGAAGGTCTCCTTACATTATTTCAGAAAGAAGGGGTAAAGGGTCTTTGGTCTGGTACATTGCCTTCACTTTTGTTAGTATCAAATCCCGCTATTCAATTTATGGTTTATGAGTCATTAAAGAGGAAAATAATGGCAAGGGGAAAATTTGACATATATTCAGCATTTGCAGTAGGAGCTGTAGCCAAAGGAATAGCGACCACTTTAACTTATCCCTTACAATTATTTCAATCAAGGCTGCGAGCTGGCACCAGTCTCAAACCATTATTTAAGGACATCAAAAAACACCCCGCAACTCTCTTTAGAGGCTTAGAGGCTAAACTATTACAAACAATCATGACTGCTGCTTTGATGTTTTTGATTTATGAAAAAGTATTTCGTCTAGTTCTAACCATCATGAGAGTGAAATTAAAAAAACATTAA
>DPOGS213519-PA
MTSSLLSYETLTHAIAGATGSVVGMAAFYPLDTIRSRLQVDDTKKLHGTTLELLIKLTKEEGIEALYHGLGPVLQSLSVSNFVYFYVFHSLRRVSSASPSAARDLLIGMVAGSVNVLLTSPLWVVNTRMKLEKNSYSSLFEGLLTLFQKEGVKGLWSGTLPSLLLVSNPAIQFMVYESLKRKIMARGKFDIYSAFAVGAVAKGIATTLTYPLQLFQSRLRAGTSLKPLFKDIKKHPATLFRGLEAKLLQTIMTAALMFLIYEKVFRLVLTIMRVKLKKH-