| DPOGS213552 | ||
|---|---|---|
| Transcript | DPOGS213552-TA | 672 bp |
| Protein | DPOGS213552-PA | 223 aa |
| Genomic position | DPSCF300033 - 207602-214271 | |
| RNAseq coverage | 911x (Rank: top 14%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL008564 | 7e-105 | 86.00% | |
| Bombyx | BGIBMGA011834-TA | 2e-111 | 85.65% | |
| Drosophila | Eip71CD-PA | 2e-73 | 57.53% | |
| EBI UniRef50 | UniRef50_Q7Q0D3 | 1e-78 | 62.79% | AGAP012395-PA n=19 Tax=Endopterygota RepID=Q7Q0D3_ANOGA |
| NCBI RefSeq | NP_001040364.1 | 6e-112 | 84.30% | methionine sulfoxide reductase [Bombyx mori] |
| NCBI nr blastp | gi|114051463 | 1e-110 | 84.30% | methionine sulfoxide reductase [Bombyx mori] |
| NCBI nr blastx | gi|114051463 | 1e-109 | 84.30% | methionine sulfoxide reductase [Bombyx mori] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0016671 | 1.4e-51 | oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | |
| GO:0019538 | 1.4e-51 | protein metabolic process | ||
| GO:0055114 | 1.4e-51 | oxidation-reduction process | ||
| KEGG pathway | ||||
| InterPro domain | [12-160] IPR002569 | 1.4e-51 | Peptide methionine sulphoxide reductase MsrA | |
| Orthology group | MCL12308 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS213552-TA
ATGAAACCACCGACAAATGCAGCGCTTTTACATGATGTGGACATCCCTACAAAGAAGGCCACCTTCGGTATGGGGTGTTTCTGGTCCAACGACTCATTGTTCGGAGCTACACCAGGAATCATTCGCACGAGGGTCGGTTACGCTGGTGGAACCACCAAGAACCCTCATTACAGAAATATAGGAGACCACACAGAAGTTATCGAATTAGACTATGATCCGAAAACGGTGACCTTCGAAGAGCTTCTCGATATATTTTGGGCGAACCACGAGTACGGGCTCACAACTAAGCTCAAGAGACAGTACCAATCTATGATTCTGTACCACGACGAGGAACAGCGCAAAGTAGCCGAACAGTCTTACAACAAGATGCAGGCTAGATGCAACGAACCCTTACGCACTGAGATCGCGCCAGCGGACGCGTTCTACGCAGCGGAGGATTATCATCAAAAATATAGATTGCAAGGTCACAAAGATCTCTGTCGGAGTCTAGGTCTGGACTCATCTAAACTACAGACTTCCCATCTAGCTGCTAGATTGAACGGCTATCTGGTGGGAGTGGGAGGCAGGTCTCAGTTCGAGGAGGAGGTCAATAAATTGGGTCTCAGCGAGAAACAAGCGGATTACGTGCGTCACGAGATAGAACGCAACGAAGGAGGAGGTCTCGCTTGCTGA
>DPOGS213552-PA
MKPPTNAALLHDVDIPTKKATFGMGCFWSNDSLFGATPGIIRTRVGYAGGTTKNPHYRNIGDHTEVIELDYDPKTVTFEELLDIFWANHEYGLTTKLKRQYQSMILYHDEEQRKVAEQSYNKMQARCNEPLRTEIAPADAFYAAEDYHQKYRLQGHKDLCRSLGLDSSKLQTSHLAARLNGYLVGVGGRSQFEEEVNKLGLSEKQADYVRHEIERNEGGGLAC-