| DPOGS213556 | ||
|---|---|---|
| Transcript | DPOGS213556-TA | 897 bp |
| Protein | DPOGS213556-PA | 298 aa |
| Genomic position | DPSCF300033 - 152189-154105 | |
| RNAseq coverage | 237x (Rank: top 43%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL021711 | 1e-61 | 63.78% | |
| Bombyx | BGIBMGA011837-TA | 2e-107 | 71.00% | |
| Drosophila | CG11294-PA | 4e-51 | 94.23% | |
| EBI UniRef50 | UniRef50_B4L3B2 | 1e-50 | 50.39% | GI15515 n=5 Tax=Endopterygota RepID=B4L3B2_DROMO |
| NCBI RefSeq | XP_001991987.1 | 2e-54 | 50.77% | GH24457 [Drosophila grimshawi] |
| NCBI nr blastp | gi|195045512 | 3e-53 | 50.77% | GH24457 [Drosophila grimshawi] |
| NCBI nr blastx | gi|195045512 | 1e-56 | 51.81% | GH24457 [Drosophila grimshawi] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0003677 | 9e-26 | DNA binding | |
| GO:0006355 | 9e-26 | regulation of transcription, DNA-dependent | ||
| GO:0043565 | 1.5e-25 | sequence-specific DNA binding | ||
| GO:0003700 | 1.5e-25 | sequence-specific DNA binding transcription factor activity | ||
| GO:0005515 | 1.1e-23 | protein binding | ||
| KEGG pathway | nvi:100119475 | 3e-45 | ||
| K12373 (HEX) | maps-> | Lysosome | ||
| Glycosaminoglycan degradation | ||||
| Amino sugar and nucleotide sugar metabolism | ||||
| Glycosphingolipid biosynthesis - globo series | ||||
| Other glycan degradation | ||||
| Glycosphingolipid biosynthesis - ganglio series | ||||
| InterPro domain | [21-87] IPR012287 | 9e-26 | Homeodomain-related | |
| [24-86] IPR001356 | 1.5e-25 | Homeobox | ||
| [15-93] IPR009057 | 1.1e-23 | Homeodomain-like | ||
| Orthology group | MCL23640 | Lepidoptera specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS213556-TA
ATGGCGGGACCGTATTTGTCACCGTTGCCGGGGGACCTTCTGACCGAGTACATGTTCGGCAGACGACGGCAGAGACGGAACAGGACGACTTTCACTCCGCAGCAGTTGAGCGAGCTGGAGTCATTATTCCAGAAGACTCATTACCCTGATGTGTTCCTCAGGGAAGAAGTCGCGTTGAGAATCAGTCTATCTGAAGCGAGAGTGCAAGTCTGGTTTCAAAATCGACGAGCTAAATGGCGTAAGCAAGCTCGCCTCCAGCTTTTGCAGGACGCCTGGAGAATGAGGTGTTTGGGGCTCGGGACACCTCCTCTTGGACTGCCAGGTCACACAAAACCACCTGAATCGTCACCAGAAGGAGGGGAATCGCCGCCACCCAAAGACAATTTAGAAACACAGTCTAATGAAAACAGTGCTGGTATGAAATCACCCCAACAGGAGACTTACCACCATAACGGAAATATGTCCGACAATCTACCCCTGCCCCATGACATACCACCCCCCATGCCGTACGGCAACGACGACAGGATACTTCAACAGCCACCGTTCCCGTTCCCGCCATTACTGATGCCCCAGCAGATGGACAACAACGAAATAGCGCCAACTGACTTGAGAATGGCGAAGAGCAATCCCTGTCATTGCACAGGAGAAGAAATAAATGAGCCGGAAAACCTAGCATACCGGAAACGAAGCGAGGACGTCAGTGACAGCGAAAGCGATACGGAAATAGATCTCACGTCACACTCCAAAGAGGATGATTTAAGAGAATCAGAAAGACTCGCAAAGAGGATAGCAACAAATATGTTCAGAAGTGACACCGTGCTGCACGACCTGTTACCTAACGATCTGACGATGGCCGTTAAGAATAACGATAGGAATGGTAGAAATGTAACGATGTAA
>DPOGS213556-PA
MAGPYLSPLPGDLLTEYMFGRRRQRRNRTTFTPQQLSELESLFQKTHYPDVFLREEVALRISLSEARVQVWFQNRRAKWRKQARLQLLQDAWRMRCLGLGTPPLGLPGHTKPPESSPEGGESPPPKDNLETQSNENSAGMKSPQQETYHHNGNMSDNLPLPHDIPPPMPYGNDDRILQQPPFPFPPLLMPQQMDNNEIAPTDLRMAKSNPCHCTGEEINEPENLAYRKRSEDVSDSESDTEIDLTSHSKEDDLRESERLAKRIATNMFRSDTVLHDLLPNDLTMAVKNNDRNGRNVTM-