DPOGS213699 | ||
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Transcript | DPOGS213699-TA | 519 bp |
Protein | DPOGS213699-PA | 172 aa |
Genomic position | DPSCF300219 + 429969-436328 | |
RNAseq coverage | 13x (Rank: top 83%) |
Annotation | ||||
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Heliconius | HMEL016421 | 9e-21 | 76.14% |   |
Bombyx | BGIBMGA010672-TA | 8e-25 | 91.25% |   |
Drosophila | Gsc-PB | 5e-25 | 94.34% |   |
EBI UniRef50 | UniRef50_D6WZK4 | 5e-28 | 58.09% | Goosecoid n=1 Tax=Tribolium castaneum RepID=D6WZK4_TRICA |
NCBI RefSeq | XP_972647.1 | 1e-28 | 58.09% | PREDICTED: similar to homeobox transcription factor [Tribolium castaneum] |
NCBI nr blastp | gi|91090854 | 1e-27 | 58.09% | PREDICTED: similar to homeobox transcription factor [Tribolium castaneum] |
NCBI nr blastx | gi|91090854 | 8e-30 | 61.54% | PREDICTED: similar to homeobox transcription factor [Tribolium castaneum] |
Group | ||||
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Gene Ontology | GO:0003677 | 1.2e-13 | DNA binding | |
GO:0006355 | 1.2e-13 | regulation of transcription, DNA-dependent | ||
GO:0005515 | 3.8e-13 | protein binding | ||
GO:0043565 | 1.9e-11 | sequence-specific DNA binding | ||
GO:0003700 | 1.9e-11 | sequence-specific DNA binding transcription factor activity | ||
KEGG pathway |   | |||
InterPro domain | [106-155] IPR012287 | 1.2e-13 | Homeodomain-related | |
[102-155] IPR009057 | 3.8e-13 | Homeodomain-like | ||
[112-156] IPR001356 | 1.9e-11 | Homeobox | ||
Orthology group | MCL30766 |   | Lepidoptera specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS213699-TA
ATGGGCGGTGCGGGCGGCTGGCAGCGTGACGCGCCCGCGCTGCTCTCCACGGCGCTGCTCCTGGGGGGCGCGAGCTGCACGGCCGGCTCGGGGGGCGACGAACTGGCAGGCGGCGGCGGACTCTTCACCATCGACAGCATCCTGGCACCACGGCCACCGCCACCCATACCGCCGCTGCAACTCCACCACCTAGCCCATACTCCCTTCCATAGAGCGCACGAACTTTTTGGCGTGAGCAGTGCAGTGTCTCAGGCAGGAAGCTACGCGGGCTTGTACGGTGGGTACGCGGCGGCGGCGCTAGCGGGTCTCTCGGGCCCGCCGCCGAAGCGCAAGAGGCGCCATCGCACCATCTTCACTGAAGAACAGCTGGAACAGCTGGAGAGCACCTTCGATAAGACCCACTACCCTGATGTAGTTCTCAGAGAACAACTCGCCTTACGAGTCGACCTCAAGGAAGAGAGAGTTGAGGCGGAAAGTTTAGAAGAGGTAAACGGATCCGAGTCAATAGAGCTGACGTGA
>DPOGS213699-PA
MGGAGGWQRDAPALLSTALLLGGASCTAGSGGDELAGGGGLFTIDSILAPRPPPPIPPLQLHHLAHTPFHRAHELFGVSSAVSQAGSYAGLYGGYAAAALAGLSGPPPKRKRRHRTIFTEEQLEQLESTFDKTHYPDVVLREQLALRVDLKEERVEAESLEEVNGSESIELT-