| DPOGS214151 | ||
|---|---|---|
| Transcript | DPOGS214151-TA | 552 bp |
| Protein | DPOGS214151-PA | 183 aa |
| Genomic position | DPSCF300014 - 785635-786413 | |
| RNAseq coverage | 431x (Rank: top 28%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL016414 | 2e-85 | 79.89% | |
| Bombyx | BGIBMGA006198-TA | 3e-73 | 67.58% | |
| Drosophila | mRpS18B-PB | 2e-54 | 70.29% | |
| EBI UniRef50 | UniRef50_G6D747 | 4e-104 | 100.00% | RPS18 n=3 Tax=Endopterygota RepID=G6D747_DANPL |
| NCBI RefSeq | XP_002021728.1 | 5e-55 | 58.76% | GL26668 [Drosophila persimilis] |
| NCBI nr blastp | gi|157704353 | 7e-80 | 74.18% | RPS18 [Trichoplusia ni] |
| NCBI nr blastx | gi|157704353 | 5e-79 | 74.59% | RPS18 [Trichoplusia ni] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005840 | 3.1e-18 | ribosome | |
| GO:0006412 | 3.1e-18 | translation | ||
| GO:0005622 | 3.1e-18 | intracellular | ||
| GO:0003735 | 3.1e-18 | structural constituent of ribosome | ||
| KEGG pathway | ||||
| InterPro domain | [91-173] IPR001648 | 3.1e-18 | Ribosomal protein S18 | |
| Orthology group | MCL10450 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS214151-TA
ATGTCACTCTTCAATAACATTCGTTCAGTTATTAATAGGGCAGTTTTATCAGATATAAGAATTGCAGTCCGTTATTATTCAGATCAAACCGATGAAAGCGAGGAACAACAGAAACCAATAGATCCTACAAAAGACCGAACAAAAATTATTCCTATAGAAACTAGTATTAGATATTTGCAAAGTGATGCATATAAAAAAACTTATGGAGACAAACCAGTATGGTTTTTATATAGACGCAATCACAAAGGAGGATTCGCACCCAGAAAGACTAGAAGAACATGTATTCGAAACGGTATAATATCGACAGGGAACCCCTGCCCTATTTGCCGCGACGAATACCTAATACTTGATCCTAAGAATGTATCGCTTCTGGAACAGTTCATATCAGAGTACACCGGACAGATCCTAGAGCCTTCTAAAACTGGTCTCTGTCAGAAAAAACATAAAGAGCTATTGGTTGCCATTGAACGAGCTTGGGATCAAGGATATATTACATATGATGTCCCTTTCAGGGAGTATGATTACAGTCTTTACAATACTAATGTAAATTGA
>DPOGS214151-PA
MSLFNNIRSVINRAVLSDIRIAVRYYSDQTDESEEQQKPIDPTKDRTKIIPIETSIRYLQSDAYKKTYGDKPVWFLYRRNHKGGFAPRKTRRTCIRNGIISTGNPCPICRDEYLILDPKNVSLLEQFISEYTGQILEPSKTGLCQKKHKELLVAIERAWDQGYITYDVPFREYDYSLYNTNVN-