DPOGS214164 | ||
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Transcript | DPOGS214164-TA | 300 bp |
Protein | DPOGS214164-PA | 99 aa |
Genomic position | DPSCF300014 - 315978-317705 | |
RNAseq coverage | 2490x (Rank: top 5%) |
Annotation | ||||
---|---|---|---|---|
Heliconius | HMEL006804 | 9e-43 | 93.75% |   |
Bombyx | BGIBMGA006209-TA | 7e-40 | 87.50% |   |
Drosophila | Sec61beta-PA | 3e-29 | 74.26% |   |
EBI UniRef50 | UniRef50_Q7PN12 | 9e-31 | 78.79% | AGAP011504-PA n=6 Tax=Culicidae RepID=Q7PN12_ANOGA |
NCBI RefSeq | NP_001037632.1 | 3e-38 | 87.50% | transport protein Sec61 beta subunit [Bombyx mori] |
NCBI nr blastp | gi|112983408 | 7e-37 | 87.50% | transport protein Sec61 beta subunit [Bombyx mori] |
NCBI nr blastx | gi|112983408 | 3e-42 | 87.50% | transport protein Sec61 beta subunit [Bombyx mori] |
Group | ||||
---|---|---|---|---|
KEGG pathway | nvi:100113628 | 9e-35 |   | |
  | K09481 (SEC61B, SBH2) | maps-> | Phagosome | |
  |   |   | Vibrio cholerae infection | |
  |   |   | Protein processing in endoplasmic reticulum | |
  |   |   | Protein export | |
InterPro domain | [3-100] IPR016482 | 2.5e-40 | Preprotein translocase Sec, Sec61-beta subunit, eukarya | |
[55-94] IPR005609 | 1.6e-21 | Preprotein translocase Sec, Sec61-beta subunit | ||
Orthology group | MCL13623 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS214164-TA
ATGTTTCAGCCAGCCGCACCAAGCTCTACATCTGTGGGATCTGGAGGCCGATCGCCAACCAAGGCAACTGGTGTTCCACGTTCGTCAACCGGAGGCACTGTGAGACAACGTAAGTCAACCACGACAACAACAGCAGCCAGGAATCGCAGCACTGGTGCTGGAACCGGTGGAATGTGGCGTTTTTACACTGATGACTCCCCCGGCGTCAAAGTAGGTCCTGTGCCTGTACTTGTCATGTCTCTGCTATTCATTGCATCTGTGTTTATGCTGCACATTTGGGGAAAATACACCAGGGCCTAA
>DPOGS214164-PA
MFQPAAPSSTSVGSGGRSPTKATGVPRSSTGGTVRQRKSTTTTTAARNRSTGAGTGGMWRFYTDDSPGVKVGPVPVLVMSLLFIASVFMLHIWGKYTRA-