MonarchBase - Protein-coding gene

DPOGS214221
Transcript	DPOGS214221-TA	1158 bp
Protein	DPOGS214221-PA	385 aa
Genomic position	DPSCF300014 + 798804-802753
RNAseq coverage	74x (Rank: top 66%)

Annotation
*Heliconius*	HMEL016411	2e-40	55.50%
*Bombyx*	BGIBMGA006197-TA	1e-57	42.65%
*Drosophila*	CG3294-PA	1e-33	32.02%
EBI UniRef50	UniRef50_UPI00015B41F8	1e-56	38.51%	UPI00015B41F8 related cluster n=1 Tax=unknown RepID=UPI00015B41F8
NCBI RefSeq	XP_001608048.1	2e-57	38.51%	PREDICTED: hypothetical protein [Nasonia vitripennis]
NCBI nr blastp	gi\|156537789	4e-56	38.51%	PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2-like [Nasonia vitripennis]
NCBI nr blastx	gi\|270006539	2e-67	42.99%	hypothetical protein TcasGA2_TC010403 [Tribolium castaneum]

Group
Gene Ontology	GO:0005634	2.9e-30	nucleus
	GO:0003723	2.9e-30	RNA binding
	GO:0000166	2.4e-12	nucleotide binding
	GO:0003676	2.9e-07	nucleic acid binding
KEGG pathway	uma:UM03893.1	6e-18
	K12836 (U2AF1)	maps->	Shigellosis
			Spliceosome
InterPro domain	[18-307] IPR009145	2.9e-30	U2 auxiliary factor small subunit
	[248-312] IPR012677	2.4e-12	Nucleotide-binding, alpha-beta plait
	[254-307] IPR000504	2.9e-07	RNA recognition motif domain
Orthology group	MCL11241		Multiple-copy universal gene

Nucleotide sequence:

>DPOGS214221-TA
ATGTCCAATTTTCAGTGTCCCAATGTAAACCAGAAAAAACGGCAAGTTGTAATGTCGATGCCCCTAAAACCGCATAAAGAATGGAGAAGAATTGTGAAACGGGAAAGAAGAAGGAGGATACGCAAACAGTTGGCTAAACAAAGAGATTGCTTACCTAATGGAAATGATAATAAAGATTGGATAAAAGCACAAGAAGAATTAGAAACATATATTTTTGAACAAGTTGAAAATTCTAACAAGGTTGAAAATGAAAAGTGGTTGGCCGCCGAAGCAGTAGCTTTAAAACACTGGAAGGAACTTCAAATCAAAAAAGAAATGTTGCTTAAGAAGCAGCTAGAACTACAAGCTAAGCTTCATCAGGAATGGGAGATGGAAAAAGAGAGAAAAGAAAAGGAGGCTCAACGTCTTAAAGAATTAGAAGAAGAAAATGTCAAGAGACAGGAAGAGTTCATGAAAAACTTAGAAGAATTCCTAAATGGTGATTGTAAGGATCCTCCACAGGAGCTGCTTACATTGTATGAAAGTCGGCCAAATTGTGACCCATGTCCATTTTATGCTAAAACTGCATGTTGCCGGTTTGGAGATGAATGTTCTAGAAACCACAAGTATCCAGGTATCAGCAAGATACTCTTAGCTCCAAATCTTTTTGGACATTTTGGCTTGGAGAATTCAAATTTTAATGAATATGACACAGATATTATGTTGGAATATGAAGATAGTGATACTTACAAGGATTTCAAAGAATTTTTTTTTGACATATTGCCAGAATTTCAAAAATTTGGCCAGGTTGTTGAGATTAAAGTTTGCAATAACTTTGAAAAGCATCTCCGAGGCAACACATATATAGAGTACTCCGACGTTCGTAGTGCAGTTTCAGCTTACAGAGCCCTTCATACAAGATGGTATGGCGGAAAACAACTCTCATTGCAATTTTGTAGACTGTTATCATGGAGTAGTGCAATATGTGGCAACAACACACGTCGTCACGTTCATGGAGGTGGTCCGAATCGCCTGAAAGAGAAAGTCCAACTTCAAGAAGTAAAAGAAAAGACGATGGTCATTCCAAAAGTAGAGAAAGAAGACACTATCAACATCGATCACCTAGATCAAGATCACATCGATATAGGGATTAAGTTTATGTTGATCTTAATGAAATAA

Protein sequence:

>DPOGS214221-PA
MSNFQCPNVNQKKRQVVMSMPLKPHKEWRRIVKRERRRRIRKQLAKQRDCLPNGNDNKDWIKAQEELETYIFEQVENSNKVENEKWLAAEAVALKHWKELQIKKEMLLKKQLELQAKLHQEWEMEKERKEKEAQRLKELEEENVKRQEEFMKNLEEFLNGDCKDPPQELLTLYESRPNCDPCPFYAKTACCRFGDECSRNHKYPGISKILLAPNLFGHFGLENSNFNEYDTDIMLEYEDSDTYKDFKEFFFDILPEFQKFGQVVEIKVCNNFEKHLRGNTYIEYSDVRSAVSAYRALHTRWYGGKQLSLQFCRLLSWSSAICGNNTRRHVHGGGPNRLKEKVQLQEVKEKTMVIPKVEKEDTINIDHLDQDHIDIGIKFMLILMK-

Monarch geneset OGS2.0

Nucleotide sequence:

Protein sequence: