Monarch geneset OGS2.0

DPOGS214312
TranscriptDPOGS214312-TA6582 bp
ProteinDPOGS214312-PA2193 aa
Genomic positionDPSCF300020 - 943459-994572
RNAseq coverage27x (Rank: top 77%)
Annotation
HeliconiusHMEL0033600.091.89% 
BombyxBGIBMGA004118-TA0.090.41% 
DrosophilaNaCP60E-PD0.080.02% 
EBI UniRef50UniRef50_Q9BMQ40.064.94%Putative BSC1 sodium channel protein n=4 Tax=Eumetazoa RepID=Q9BMQ4_BLAGE
NCBI RefSeqXP_975663.20.067.37%PREDICTED: similar to putative BSC1 sodium channel protein [Tribolium castaneum]
NCBI nr blastpgi|3852987090.088.32%voltage-dependent cation channel SC1 [Bombyx mori]
NCBI nr blastxgi|3852987090.088.83%voltage-dependent cation channel SC1 [Bombyx mori]
Group
Gene OntologyGO:00160204.1e-60membrane
GO:00550854.1e-60transmembrane transport
GO:00052164.1e-60ion channel activity
GO:00068114.1e-60ion transport
GO:00052483.3e-09voltage-gated sodium channel activity
GO:00015183.3e-09voltage-gated sodium channel complex
GO:00068143.3e-09sodium ion transport
KEGG pathway 
InterPro domain[223-466] IPR0058214.1e-60Ion transport
[1850-1869] IPR0016963.3e-09Voltage gated sodium channel, alpha subunit
Orthology groupMCL10067 Multiple-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS214312-TA
ATGGAGGAGGAGAGGCGGCTGTCCTTCCCGCCACCGGCGCCGTTGCACTCGCCCGGAGAGGAGATTGACGGCTCCCGTCTTCTGGGAGAGATAGTCCGTACGTTAGAAGCAACTAATCCCGATGCCGTCGCTCCACTGGTCGCGTCGCGATCCCGGGACACGCTTGATGCGGAAGAGGAAAAGCCTCGGCGGGAAGAACTTCGGATACCCCTCGATGTCACGTTCTCGGAGTCTGTTGGACGGAGTGATGAGCCCCGGGCGGTTGTCACTCCGTTCACGCGTGAGTCCGCCAAACGTGCTGGTTCTAGGGGTGCGCAACTGGTTAGAGAGTTCGGCTTCATGCCTCGACGGCGACTCAGCGTTGAAGACGGAGCTCGGTTACCGAGGAAGTATGAACCCTTCCCGCCGAAATTGTACGGAAGGCCATTGGAGGAGATCGACAATTTTATTTACGATGAGACTTTCTGCGTGGTGTCGAAGAGGTTCCGTAAGAACTACATCCACCGGTTCACTGCCACGAGATCGCTTTTCTGGTGGTCACCGTGGTCCCCAGTGCGACGTGCCTGCGTCTACCTCTCCACCAACCAGTACTTCGACTACTTCGTCATGGCCACCATACTGCTCAACTGTGTCTTCCTCGCCATGTCGGAGACTATCGAAGAAGCTGAATACATATTTCTGGCGATATACACTGCGGAGATGATAATAAAATGCATAGCGAAAGGTTTTATACTTAATAAGTATACTTATCTACGGAACCCATGGAACTGGCTCGACTTCGTGGTAATAACGTCTGGTTACGCCACCATCGGCATGGAGGTTGGCAACCTTGCTGGCTTGCGGACGTTCAGAGTGCTAAGGGCTTTGAAAACTGTTTCCATTATGCCCGGTCTGAAAACTATTATCAACGCGTTGCTACATTCCTTTAAACAGCTGGCGGAAGTAATGACCTTGACAATCTTCTGTCTCATGGTGTTTGCACTATTTGCTCTTCAAGTATACATGGGGGAGTTGAGGAATAAGTGTGTACAGAACTTGGTTATACCACCCGGCGAGAACTTCACTGACGAGCTGTGGTCACAATGGATAAGCGAACCCTCACACTGGATGGTGGATGATGATGAGGTGCCTATTATCTGTGGCAATCTGACCGGCGCTAGGCACTGCCCGTCTGAATACACATGCCTCTGTGTAGGACCCAATCCAAACCACGGTTATACCAACTTCGACAATTTTCTATGGTCCATGCTCACTACGTTTCAACTCATCACCCTGGACTATTGGGAGAACGTGTACAATATGGTTCTATCGTCGTGTGGACCGATGTCGGTGTCATTTTTCACTGTTGTGGTCTTCTTCGGCTCCTTCTACCTCATCAACCTGATGCTGGCTGTGGTGGCGCTGAGCTACGAAGAAGAATCGCAGATAACACAAGAGGAAAGAAAAAAGGATCTAAACGAACATCGCGACGATTCCACGTTCAGCTTTGATCCGACGTCTCTAGCTGTTCGGACCCTCGCCAAGGATTCTAAGAAACGTATTGATGCAAGGAAAGGCCTGCTTTTAGCATCGTACTCACGGAAGAGGACGAGGCGACGCAAACGAGGGAAAAGCACGATACACCACACGAACACTGTCAGTGTTAGTGAAAGATCCCGGTCACGGTCACGGTCTCGCTCAGTTACGCCAAGCGGCACGCCTCCACCGCTGCCTGCGCCAGCGGCACCACCACCACCATCACATACCTTACATCCAGATAATGCTTTGGGTAGGGGAGCCCTAAGCATGGCGGGTCGTCAATTAAGCGACCACAGTAACAACAGAGAGTCGTCGCTCGATGACTCCGGAGTCGTGGATGACCACGACGAGGGTGAGCACACCTCCGATGACCAAGCACCACAACATCGACGACACCTACTTCCCCACCCTACCACTTTACCGCTAAAACAAGAAAATAAGAAACTGGAATCAAAACTAAAGAATGGTTCAAAAACAGAAATACAAGTGGAACCCGCAAAAAAGAACGAAAAAAGCACCATACATGAGAGATATCCTTTGAACCCGGACTACCTCAACCAGATCGTAGTTCTAGGGGCGGACTGGCCATACAAGCGAACGCCCGACCTCCCCCAAGCGGAGACGACGAAAATTAATGAGCTCAGTTTATTGGCAGCCACGCACAAATCTCATATGGGCAATTATGAACCAAATTGCACTTACTTCACAGATGAGCTAGTGGATAGAAATTGCGAGTGCTGCGTAACATGTTGTATAGACTATGAGGGCTGGCTGCAATTTCAGAACTGTTTGTATGGAATAGTCAAAGATCCATTATTTGAACTATTCATAACTACTTGTATAGTGCTTAATACACTTTTCCTGGCCCTTGAGCATCATGGGATGAGTGAAAATGTGAGACAAGCCTTAGATATAGGAAATAAGGTCTTCACGTCAATTTTTACATTAGAATGTATTATGAAAGTTATGGCAATGAGTAAAGACTTCTTCGCCTGTGGTTGGAACATATTCGATTTAATCATCGTTTCTGCTAGTCTCTTGGATCTTATATTCGAACTTGTAGATGGCCTATCTGTGTTAAGAGGCCTTCGTTTGTTACGTGTGTTAAAGTTAGCTCAATCATGGACTACTATGAAAGTTTTGTTAAGTATTATAATATCGACAATAGGTGCTCTTGGTAACTTAACGTTCGTGTTAGTTATAGTTATATATATATTTGCTGTTATCGGTATGCAGTTATTCTCGAAATCCTACACACCAGAGAAGTTCGATCCTGATCCCGTGCCAAGGTGGAACTTTAACGACTTCTTCCACTCGTTCATGATGATATTTCGTATCCTTTGTGGAGAGTGGATAGAACCGCTATGGGACTGTATGCGAGCAGAGCAAGCTAGTGGTGCGGAGAGTTGTTTCTTTATTTTCCTCCCCGCGCTGGTGATGGGCAACTTCATGGTGCTCAACCTCTTCCTTGCCTTGTTGCTTAATAGTTTTAATAGTGAAGAACTAAAGAATCGAAAAGAGGAAGTAGGAGAGGATTCAAAATTAGCTAAGAGTTTCGATAGAATACGTTCAATAGTAAGAAAAAAAGGTTTTCTTATATCTAGAAGTAAAGAGACTGAAAAAAAATCTAAATTAGAAGAGCTAGTAAATGAATTTATGATACAACATCGTGCTATGAAAGAGCAAAAAGAATCAATACCCAATGAACAAAGAATTTCTACAACTATGCAGGAAACTATTTTATTTCCTCATGACAACGTTTATAGCCACAGTTACCAGGAAGCGTTAAATAGGCCAATATCTGTTGGATCTGATTTTGCGTATCCACAACTATATCAAGCAGGCAATAATTGTAATCATGGCAGTCAAGAAACACTTAAAGATGTTCGAGATTTAGCAGCGGAGCATAAAATAACGAGCATAAGGGAAGACTCAAAGGAAAATTTGGATGATACCGTATCCACAGATCAAATAGCCGCTCAAAAACTACTTAATCAAATGTCATCCGGTTATCATACACAGCCCTCGGATTCTAGAGATGAAAATGAACATTATGAAATGGCTCAAATATCAAGTAGAACCACTCCTGAAAAAAGACGTCACGGACTGTTATATGGTCGGGACCCACCAAAAATACCTAGCGAAGAAGATGTAAAACATCCATGGCAGACCCTAGTATCATATGTGGATGAATTAACTGTTGGAGGAAGGAAAAATTCAAAGGGCCAGTATATTGATCCAATGGGAAAATTCCCTGGTTTCGGTAAGCAGAAGGAACCTAAAGTGCCTCAGGATTGTTTTCCACGACAATGCTACAAGCAATGTCGTTGTTGGGATGCATGTATTCGGACAAATTTGGGTCAAAAGTGGATGTTCATACGAACATTTGTTCTTCGTTACGTAGACACGCCCGCCTTTGAGTGGTTTGTCCTTGTGCTAATTTTTGCATCCAGTATCACTCTATGTTTTGAAGATATTCACCTCGAAAAAAACATACCTCTTAAGAAAATTTTGTACTGGACAAATCTTAGTTTCTGTATGATTTTTGTCATCGAGATGTTCTTTAAATGGATAGCACTGGGCTTTTACAGATACTTTACTAGTTTTTGGACATTATTGGACTTTACTATTGTTTTTGTGTCTGTGTTTAGTCTTCTTATAGAGGAAAACGAAAATTTAAAGGTTCTACGATCTCTAAGAACTCTACGTGCTTTGAGACCTTTGCGAGCTATTTCAAGATGGCAAGGCATGAGAATTGTTGTCAATGCACTTATGTATGCAATACCCAGTATTTTTAATGTGTTATTAGTTTGTTTAGTATTTTGGTTGATTTTTTCAATTATGGGAGTGCAGTTTTTTGGTGGAAAATTTTTTAAATGTGTAGATGATGAAGGCGAATTATTACCATTAGAGATAGTTAATGATAAATGGGAATGCTACTACAATAATTTTTCGTGGATAAACTCTAAAATATCTTTTGATCATGTGGGAATAGCATATTTGGCCTTATTTCAAGTTGCAACATTTGAGGGCTGGATGGAAGTAATGGCCGATGCTGTGGACGCAAGAGGTGTTGATCTTCAACCAGCGAGAGAAGCTAATCTTTATGCATACATATATTTTGTAATTTTTATTGTATGCGGTTCATTCTTTACATTAAATCTATTCATAGGAGTTATTATAGACAATTTTAATATGCTTAAGAAAAAGTACGAAGGCGGAGTATTAGAAATGTTTCTTACGGAGAGCCAAAAGCACTATTATACAGCCATGAAGAAGTTGGGTAGAAAGAAGCCTCAAAAAGTTATAAAGCGGCCAAGGAATCAGTTTTTAGCCATGTTTTATGACCTTTCTAATTCACGTCGATTCGAAATAGCTATATTTGTTCTGATATTCTTAAATATGCTCACGATGGGTATAGAGCATTATGACCAACCGCATTCAGTTTTCTTTGTACTAGAAGTCAGTAACGCATTTTTTACAACAGTTTTTGGCTTAGAGGCTATAGTTAAAATAATAGGACTCCGATATCATTACTTCACGGTACCGTGGAATGTTTTCGATTTTTTGTTAGTTTTAGCATCCATCTTAGGTATTCTTATGGAAGATATAATGATAGATTTACCAATATCTCCCACCCTACTCCGAGTGGTTCGAGTCTTTCGGATAGGGAGAATTTTAAGACTGATTAAAGCCGCTAAAGGCATAAGAAAACTGTTGTTTGCTTTAGTGGTGTCGCTACCAGCACTATTCAATATCGGTGCCTTGTTAGCTCTCATTACGTTCATCTACGCAATAATCGGTATGTCCGTGTTCGGACACGTCAAGGAACAGGGAGCTTTGGATGATATTGTCAACTTTCAGACCTTTGGTAGAAGTATGCAGCTTCTTTTTCGTCTAATGACATCAGCTGGTTGGAACGACGTTCTAGAGTCTTTGATGATTCAACCTCCTGATTGCGAGCTGGGAGACCATGGCCACTCGAATGGAAATTGTGGGAGTCCGTTGCTAGCTATAACGTACTTTACTTCCTTCATCATTATTAGTTATATGATTGTTATAAACATGTACATAGCCATCATCCTAGAAAACTTCAATCAAGCTCATCAAGAAGAAGAAATTGGTATAGTTGAGGACGATTTAGAAATGTTTTATATCAGATGGTCTAAATACGACCCGCACGCTACGCAATTTATAAGTTTCGCTCAATTATCGGATTTCATTGCTTCTTTAGATCCTCCGTTAGGAATACCTAAGCCAAATACAGTAGCCCTCGTAAGCTTCAACCTACCAATTGCCAGAGGTAACAAAATTCACTGCTTAGACATATTACATGCACTGGTAAAACATGTTTTGGGTCATGTGGAAGAAACAGATACGTTTAGGCAATTACAAGAACAAATGGATATTAAGTTTAAAAAACAGTTCCCTACAAGAAAGGAATTGGAAATTGTTTCCTCTACAAGAATTTGGAAGAGGGAGGATAAAGCGGCAAGGACAATACAGCGATCGTTTAGGGAATACATAAAGCGAAAGAACCGCAGTCCTTCACAAGAAGAAGAAAGCACAAAGTGGTCGCCAGGCCACGGATGGGGTGGTAAGCTTAGTGCACTGTTGCATGTTCGGAGGGGATCTCACGCTTCGAGCAGGAAGTCTTCTAGAGCTTCTGATGCTTCTGATTTGAGCGATGTCGGTGGTGCCTGGCTCAACTTACCCCTTCTTTTACTACCGGGGGCTGGTCCCAGTGATATGGTTCCCAGTTCTGAAACAGCTCCTCCGCGCAGACGGTCTGCCTATGGTTTGCCACTTTTTCTTCGTCACCAAGATGCCGTTGATGAAGACAGCGGCATGAAACGCGCAGGTTCACTTCGTTTAACTCCTCGGAGGAGTTCAGCTCGGAGGCCCACTCCACCCGCCCGAGCGAGTACTCCGTCGCCTCACGCTAGCAGCGCTGTCAGCATCCTAGTTACTGAGGCTTCCCCTGACGCAGCCCCTCCACCGGCAGCGCCTCCGACTGTCGTCAGAGTCCTCGTCCATAGGGAGAGTGATGAACAGCCCAGCTGA

Protein sequence:

>DPOGS214312-PA
MEEERRLSFPPPAPLHSPGEEIDGSRLLGEIVRTLEATNPDAVAPLVASRSRDTLDAEEEKPRREELRIPLDVTFSESVGRSDEPRAVVTPFTRESAKRAGSRGAQLVREFGFMPRRRLSVEDGARLPRKYEPFPPKLYGRPLEEIDNFIYDETFCVVSKRFRKNYIHRFTATRSLFWWSPWSPVRRACVYLSTNQYFDYFVMATILLNCVFLAMSETIEEAEYIFLAIYTAEMIIKCIAKGFILNKYTYLRNPWNWLDFVVITSGYATIGMEVGNLAGLRTFRVLRALKTVSIMPGLKTIINALLHSFKQLAEVMTLTIFCLMVFALFALQVYMGELRNKCVQNLVIPPGENFTDELWSQWISEPSHWMVDDDEVPIICGNLTGARHCPSEYTCLCVGPNPNHGYTNFDNFLWSMLTTFQLITLDYWENVYNMVLSSCGPMSVSFFTVVVFFGSFYLINLMLAVVALSYEEESQITQEERKKDLNEHRDDSTFSFDPTSLAVRTLAKDSKKRIDARKGLLLASYSRKRTRRRKRGKSTIHHTNTVSVSERSRSRSRSRSVTPSGTPPPLPAPAAPPPPSHTLHPDNALGRGALSMAGRQLSDHSNNRESSLDDSGVVDDHDEGEHTSDDQAPQHRRHLLPHPTTLPLKQENKKLESKLKNGSKTEIQVEPAKKNEKSTIHERYPLNPDYLNQIVVLGADWPYKRTPDLPQAETTKINELSLLAATHKSHMGNYEPNCTYFTDELVDRNCECCVTCCIDYEGWLQFQNCLYGIVKDPLFELFITTCIVLNTLFLALEHHGMSENVRQALDIGNKVFTSIFTLECIMKVMAMSKDFFACGWNIFDLIIVSASLLDLIFELVDGLSVLRGLRLLRVLKLAQSWTTMKVLLSIIISTIGALGNLTFVLVIVIYIFAVIGMQLFSKSYTPEKFDPDPVPRWNFNDFFHSFMMIFRILCGEWIEPLWDCMRAEQASGAESCFFIFLPALVMGNFMVLNLFLALLLNSFNSEELKNRKEEVGEDSKLAKSFDRIRSIVRKKGFLISRSKETEKKSKLEELVNEFMIQHRAMKEQKESIPNEQRISTTMQETILFPHDNVYSHSYQEALNRPISVGSDFAYPQLYQAGNNCNHGSQETLKDVRDLAAEHKITSIREDSKENLDDTVSTDQIAAQKLLNQMSSGYHTQPSDSRDENEHYEMAQISSRTTPEKRRHGLLYGRDPPKIPSEEDVKHPWQTLVSYVDELTVGGRKNSKGQYIDPMGKFPGFGKQKEPKVPQDCFPRQCYKQCRCWDACIRTNLGQKWMFIRTFVLRYVDTPAFEWFVLVLIFASSITLCFEDIHLEKNIPLKKILYWTNLSFCMIFVIEMFFKWIALGFYRYFTSFWTLLDFTIVFVSVFSLLIEENENLKVLRSLRTLRALRPLRAISRWQGMRIVVNALMYAIPSIFNVLLVCLVFWLIFSIMGVQFFGGKFFKCVDDEGELLPLEIVNDKWECYYNNFSWINSKISFDHVGIAYLALFQVATFEGWMEVMADAVDARGVDLQPAREANLYAYIYFVIFIVCGSFFTLNLFIGVIIDNFNMLKKKYEGGVLEMFLTESQKHYYTAMKKLGRKKPQKVIKRPRNQFLAMFYDLSNSRRFEIAIFVLIFLNMLTMGIEHYDQPHSVFFVLEVSNAFFTTVFGLEAIVKIIGLRYHYFTVPWNVFDFLLVLASILGILMEDIMIDLPISPTLLRVVRVFRIGRILRLIKAAKGIRKLLFALVVSLPALFNIGALLALITFIYAIIGMSVFGHVKEQGALDDIVNFQTFGRSMQLLFRLMTSAGWNDVLESLMIQPPDCELGDHGHSNGNCGSPLLAITYFTSFIIISYMIVINMYIAIILENFNQAHQEEEIGIVEDDLEMFYIRWSKYDPHATQFISFAQLSDFIASLDPPLGIPKPNTVALVSFNLPIARGNKIHCLDILHALVKHVLGHVEETDTFRQLQEQMDIKFKKQFPTRKELEIVSSTRIWKREDKAARTIQRSFREYIKRKNRSPSQEEESTKWSPGHGWGGKLSALLHVRRGSHASSRKSSRASDASDLSDVGGAWLNLPLLLLPGAGPSDMVPSSETAPPRRRSAYGLPLFLRHQDAVDEDSGMKRAGSLRLTPRRSSARRPTPPARASTPSPHASSAVSILVTEASPDAAPPPAAPPTVVRVLVHRESDEQPS-