| DPOGS214329 | ||
|---|---|---|
| Transcript | DPOGS214329-TA | 222 bp |
| Protein | DPOGS214329-PA | 73 aa |
| Genomic position | DPSCF300020 - 581677-584131 | |
| RNAseq coverage | 55x (Rank: top 69%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL014238 | 1e-21 | 91.67% | |
| Bombyx | % | |||
| Drosophila | sbb-PG | 2e-19 | 82.61% | |
| EBI UniRef50 | UniRef50_B0WPL4 | 3e-17 | 66.18% | Sorting nexin n=5 Tax=Diptera RepID=B0WPL4_CULQU |
| NCBI RefSeq | XP_973606.1 | 4e-19 | 80.00% | PREDICTED: similar to AGAP005030-PA [Tribolium castaneum] |
| NCBI nr blastp | gi|91086295 | 1e-17 | 80.00% | PREDICTED: similar to AGAP005030-PA [Tribolium castaneum] |
| NCBI nr blastx | gi|158292405 | 4e-17 | 67.65% | AGAP005030-PA [Anopheles gambiae str. PEST] |
| Group | ||||
|---|---|---|---|---|
| KEGG pathway | spu:582941 | 8e-09 | ||
| K10847 (XPA) | maps-> | Nucleotide excision repair | ||
| Orthology group | MCL17240 | Insect specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS214329-TA
ATGACTCAGCTTTTTGAGACGGCTGAAGTATGTGTGGGGACGTCTGTGGGCACGATCACCGAGCCTGACTGCCTCGGTCCCTGCGAGCCTGGTACATCGGTCACGCTGGAGGGCATCGTGTGGCACGAAACGGAAGGTGGTGAGTTGTTACTAGCGCACGGCTCCACGCACTGCAGCCTCATCCAACACCTCCAGCACGCTTATGCACGCCTAGTACTTTGA
>DPOGS214329-PA
MTQLFETAEVCVGTSVGTITEPDCLGPCEPGTSVTLEGIVWHETEGGELLLAHGSTHCSLIQHLQHAYARLVL-