| DPOGS214343 | ||
|---|---|---|
| Transcript | DPOGS214343-TA | 258 bp |
| Protein | DPOGS214343-PA | 85 aa |
| Genomic position | DPSCF300020 - 185924-189962 | |
| RNAseq coverage | 28x (Rank: top 76%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL004617 | 1e-27 | 64.77% | |
| Bombyx | BGIBMGA013477-TA | 3e-07 | 39.29% | |
| Drosophila | CG31272-PA | 1e-08 | 50.00% | |
| EBI UniRef50 | UniRef50_UPI0002246A3E | 4e-09 | 51.67% | UPI0002246A3E related cluster n=2 Tax=unknown RepID=UPI0002246A3E |
| NCBI RefSeq | XP_001814583.1 | 6e-10 | 43.10% | PREDICTED: similar to CG31272 CG31272-PA [Tribolium castaneum] |
| NCBI nr blastp | gi|328792189 | 1e-08 | 51.61% | PREDICTED: synaptic vesicle glycoprotein 2C-like [Apis mellifera] |
| NCBI nr blastx | gi|189234339 | 2e-09 | 38.96% | PREDICTED: similar to CG31272 CG31272-PA [Tribolium castaneum] |
| Group | ||||
|---|---|---|---|---|
| KEGG pathway | tca:661411 | 2e-06 | ||
| K06258 (SV2) | maps-> | ECM-receptor interaction | ||
| InterPro domain | [1-84] IPR016196 | 1.4e-06 | Major facilitator superfamily domain, general substrate transporter | |
| Orthology group | MCL35017 | Lepidoptera specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS214343-TA
ATGGTTGCTTTATTCTCCACTGATGTTGCTATTGCGCAAACAATGAATTCTTTAAATCAAGCACTTGTATTAGAGCACTTCCCGACTACAACGAGGTCTCTAGCCATAGCCGTGCTGATGACTTGCGGCCGTATTGGAAGTTTGGTGGGTAATATTTTATTTCCCATTCTCCTCGACAAGGGCTGTGTCGTGCCCTTCTATACATTGGCTGGAAGTATTACCTCTCTGAGTTTTGTGTTACCAGTTAAAAAGAAATAA
>DPOGS214343-PA
MVALFSTDVAIAQTMNSLNQALVLEHFPTTTRSLAIAVLMTCGRIGSLVGNILFPILLDKGCVVPFYTLAGSITSLSFVLPVKKK-