DPOGS214366 | ||
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Transcript | DPOGS214366-TA | 636 bp |
Protein | DPOGS214366-PA | 211 aa |
Genomic position | DPSCF300020 + 724458-727096 | |
RNAseq coverage | 667x (Rank: top 19%) |
Annotation | ||||
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Heliconius | HMEL006356 | 2e-115 | 97.01% |   |
Bombyx | BGIBMGA003979-TA | 6e-116 | 97.51% |   |
Drosophila | CG4203-PA | 1e-66 | 58.10% |   |
EBI UniRef50 | UniRef50_Q9Y6X3 | 5e-65 | 58.65% | MAU2 chromatid cohesion factor homolog n=62 Tax=Euteleostomi RepID=SCC4_HUMAN |
NCBI RefSeq | XP_394668.2 | 8e-95 | 77.00% | PREDICTED: similar to CG4203-PA [Apis mellifera] |
NCBI nr blastp | gi|307168026 | 8e-95 | 77.46% | Uncharacterized protein KIAA0892 [Camponotus floridanus] |
NCBI nr blastx | gi|307168026 | 2e-91 | 77.46% | Uncharacterized protein KIAA0892 [Camponotus floridanus] |
Group | ||||
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Gene Ontology | GO:0005488 | 1.8e-08 | binding | |
KEGG pathway |   | |||
InterPro domain | [1-178] IPR019440 | 3e-33 | Cohesin loading factor | |
[8-166] IPR011990 | 1.8e-08 | Tetratricopeptide-like helical | ||
Orthology group |   |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS214366-TA
ATGTCCATGAACTGTATGGAGGCGGCCGAAGCACAGTTCCATACAGCCATACATATGTCACAAGAAAGGGATTTATGGATGTTTGCGAAACTGAACCTAGCTATAGTTTATTTGAGAGGCAGACGGGACAATGACCTGGCACAGTTGATGGAGCAGGTTCGACCAGAGGCGTTGCCTACATACGCCCACGGTCTGCGAGCTGCCTCCTACTACGTGCTGGGACTGCAGGCCTTTTTCCAGGCGCGGTACAACGAGGCCAAACGGTATCTCCGGGAGACATTAAAGATGGCAAATGCGGAGGACCTGAACCGCCTGACGTCCTGTTCGCTGGTATTGCTCGGCCACATCTTCCTGTCGATAAACAACTCGCGGGAGAGTATGAACATGGTGACACCGGCCATGCAACTCGCTAGCAAAATACCCGACGTCCATGTACAGCTGTGGGCATCCGCGATACTAAAAGATCTGTATCGTCTCGCGGGCGACACGGAACGAGAGAACGAGGCATACCAGATGCATTGTAACTTCTCCCAGGCGTTGCTCAAGGACCACTTCCAAGCCACCCAACTGCCGCAGCACGCGCTCGTGCACTGGACCACGGGCGCGCCCCCCGCCCTGCCCCCTCCACACTCTTAG
>DPOGS214366-PA
MSMNCMEAAEAQFHTAIHMSQERDLWMFAKLNLAIVYLRGRRDNDLAQLMEQVRPEALPTYAHGLRAASYYVLGLQAFFQARYNEAKRYLRETLKMANAEDLNRLTSCSLVLLGHIFLSINNSRESMNMVTPAMQLASKIPDVHVQLWASAILKDLYRLAGDTERENEAYQMHCNFSQALLKDHFQATQLPQHALVHWTTGAPPALPPPHS-