DPOGS214417 | ||
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Transcript | DPOGS214417-TA | 708 bp |
Protein | DPOGS214417-PA | 235 aa |
Genomic position | DPSCF300069 + 234792-237531 | |
RNAseq coverage | 8x (Rank: top 86%) |
Annotation | ||||
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Heliconius | HMEL012790 | 3e-71 | 71.58% |   |
Bombyx | BGIBMGA011228-TA | 5e-84 | 75.88% |   |
Drosophila | Mdr50-PA | 1e-57 | 58.14% |   |
EBI UniRef50 | UniRef50_E9LP53 | 1e-63 | 62.37% | ATP-binding cassette sub-family B member 3 n=2 Tax=Trichoplusia ni RepID=E9LP53_TRINI |
NCBI RefSeq | XP_623564.2 | 3e-62 | 60.94% | PREDICTED: similar to Multidrug resistance protein homolog 49 (P-glycoprotein 49) [Apis mellifera] |
NCBI nr blastp | gi|319894766 | 3e-63 | 62.37% | ATP-binding cassette sub-family B member 3 [Trichoplusia ni] |
NCBI nr blastx | gi|319894766 | 3e-60 | 66.11% | ATP-binding cassette sub-family B member 3 [Trichoplusia ni] |
Group | ||||
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Gene Ontology | GO:0005524 | 3.6e-16 | ATP binding | |
GO:0016887 | 3.6e-16 | ATPase activity | ||
KEGG pathway | ame:551167 | 9e-62 |   | |
  | K05658 (ABCB1) | maps-> | ABC transporters | |
InterPro domain | [52-160] IPR003439 | 3.6e-16 | ABC transporter-like | |
Orthology group |   |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS214417-TA
ATGGTCTGCACGGTGTACTGTTCATTGTCCTGGGGGTCATGTTCGTCGGCCGACTGCTCGTTCTCCTGCTCTTCATCCTCAGACGATGACAGTAGACCTGGTGTAACTATTCTACGTGACGTATATACTAGTGTTTCCCTCAAACAGACGCTAGATGGCAGAGACATCAAAACGTCTCTGACGTTGAAGAAGCTGCGGAGTCAGCTGGGCCTGGTGCAGCAGGAGCCTGTCATGTTCGAGAGGAGCATCAGGGAGAATATAGCATACGGTGACAACACCAGGGAAATACCGCTGCAAGAGATAGTCACGGCAGCACAGATGGCCAACGTTCATACCTTCATAGCCGGCTTACCGTCGGGTTACGAAACGGTTCTGGAAGCGGGTAGTGCTGCACTGTCTGGTGGTCAGAAGCAGCGTGTAGCAATCGCCAGGGCTCTCATCCGGAACCCCCGAGTATTACTGCTGGATGAGGCGACTTCCGCTTTGGATGCTGCCAGCGAGAAGGTGGTCCAAGCTGCTTTAGAAGTGGCGTCCAAAGATAGGACTACCATTATCATAGCTCACAGACTCGCCACAATCAGACACGCAGACCTTATATGTGTATTGGACAAAGGTGTGATAGCTGAGAGTGGTACACATGAAGAACTAGTTCGCAAACGTGGTTTGTATTGGGAGTTATTACAACAACAGGGACCGAATGGGGCGTGA
>DPOGS214417-PA
MVCTVYCSLSWGSCSSADCSFSCSSSSDDDSRPGVTILRDVYTSVSLKQTLDGRDIKTSLTLKKLRSQLGLVQQEPVMFERSIRENIAYGDNTREIPLQEIVTAAQMANVHTFIAGLPSGYETVLEAGSAALSGGQKQRVAIARALIRNPRVLLLDEATSALDAASEKVVQAALEVASKDRTTIIIAHRLATIRHADLICVLDKGVIAESGTHEELVRKRGLYWELLQQQGPNGA-