| DPOGS214473 | ||
|---|---|---|
| Transcript | DPOGS214473-TA | 513 bp |
| Protein | DPOGS214473-PA | 170 aa |
| Genomic position | DPSCF300122 - 492661-506461 | |
| RNAseq coverage | 43x (Rank: top 72%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL009702 | 2e-48 | 75.42% | |
| Bombyx | BGIBMGA013358-TA | 1e-68 | 100.00% | |
| Drosophila | sv-PA | 4e-70 | 93.85% | |
| EBI UniRef50 | UniRef50_B4H9Q0 | 2e-68 | 94.62% | GL18401 n=6 Tax=Drosophila RepID=B4H9Q0_DROPE |
| NCBI RefSeq | XP_002027579.1 | 4e-69 | 94.62% | GL18401 [Drosophila persimilis] |
| NCBI nr blastp | gi|195173607 | 6e-68 | 94.62% | GL18401 [Drosophila persimilis] |
| NCBI nr blastx | gi|198462147 | 6e-65 | 94.62% | GA27911 [Drosophila pseudoobscura pseudoobscura] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0003677 | 3e-89 | DNA binding | |
| GO:0006355 | 3e-89 | regulation of transcription, DNA-dependent | ||
| GO:0005515 | 1.7e-39 | protein binding | ||
| KEGG pathway | ||||
| InterPro domain | [23-147] IPR001523 | 3e-89 | Paired box protein, N-terminal | |
| [24-145] IPR009057 | 1.7e-39 | Homeodomain-like | ||
| [26-91] IPR011991 | 7.4e-37 | Winged helix-turn-helix transcription repressor DNA-binding | ||
| Orthology group | MCL15232 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS214473-TA
ATGGGTGTGCGCCTGCGCATGACGACGACTCACCTTGAACATCACCAGGGGATGGAAGGTGGTGCAGGTCATGGCGGGGTTAATCAATTAGGTGGAGTTTTTGTTAACGGGAGACCTCTGCCGGATGTCGTGCGTCAGAGAATAGTGGAACTCGCCCACAGCGGAGTCAGGCCCTGTGACATCAGCAGACAACTGAGGGTGTCCCATGGATGTGTCTCCAAGATACTGTCACGGTATTACGAAACGGGCAGTTTCAAGGCCGGCGTGATAGGGGGCTCGAAACCTAAAGTGGCGACTCCGCCTGTGGTAGACGCGATCGCGGCTTACAAACGAGAGAATCCAACCATGTTCGCCTGGGAGATAAGGGACAGACTCCTCAGTGAAGGCATCTGCAGTCAAGACAACGTTCCCAGCGTGTCCAGTATTAATAGGATATCCGGAGCTCTGAGCACGTGTCCTCGTCCGGGTAAATTCACCCTCCATCCGGCACGCAACCCCTTAGTGGAGCCATGA
>DPOGS214473-PA
MGVRLRMTTTHLEHHQGMEGGAGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHSGVRPCDISRQLRVSHGCVSKILSRYYETGSFKAGVIGGSKPKVATPPVVDAIAAYKRENPTMFAWEIRDRLLSEGICSQDNVPSVSSINRISGALSTCPRPGKFTLHPARNPLVEP-