| DPOGS214523 | ||
|---|---|---|
| Transcript | DPOGS214523-TA | 447 bp |
| Protein | DPOGS214523-PA | 148 aa |
| Genomic position | DPSCF300287 - 98014-99227 | |
| RNAseq coverage | 49211x (Rank: top 0%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL010056 | 6e-74 | 89.86% | |
| Bombyx | BGIBMGA010970-TA | 4e-75 | 90.54% | |
| Drosophila | RpL26-PA | 1e-61 | 75.17% | |
| EBI UniRef50 | UniRef50_F4WTD7 | 4e-66 | 82.43% | 60S ribosomal protein L26 n=17 Tax=root RepID=F4WTD7_ACREC |
| NCBI RefSeq | NP_001037233.1 | 1e-73 | 90.54% | ribosomal protein L26 [Bombyx mori] |
| NCBI nr blastp | gi|315115475 | 2e-74 | 92.57% | ribosomal protein L26 [Euphydryas aurinia] |
| NCBI nr blastx | gi|315115475 | 6e-72 | 92.57% | ribosomal protein L26 [Euphydryas aurinia] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0015934 | 3.2e-102 | large ribosomal subunit | |
| GO:0006412 | 3.2e-102 | translation | ||
| GO:0003735 | 3.2e-102 | structural constituent of ribosome | ||
| KEGG pathway | nvi:100119535 | 7e-67 | ||
| K02898 (RP-L26e, RPL26) | maps-> | Ribosome | ||
| InterPro domain | [2-147] IPR005756 | 3.2e-102 | Ribosomal protein L26/L24P, eukaryotic/archaeal | |
| [8-126] IPR014723 | 1.5e-45 | Ribosomal protein L24, SH3-like | ||
| [8-127] IPR008991 | 5e-38 | Translation protein SH3-like | ||
| [51-83] IPR005824 | 2e-08 | KOW | ||
| Orthology group | MCL13167 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS214523-TA
ATGAAGTACAATAAGCTGGTAACGTCCTCCAGGAGGAAAAACAGGAAGAGGCATTTCAGTGCTCCTTCCCACATCCGAAGAGTGCTTATGTCTGCACCACTCTCAAAGGAGCTTAAACAAAAATTCAATGTTAAGTCTATGCCAATCCGCAAGGACGATGAAGTACAGGTAGTACGTGGACATTACAAAGGCCAACAGATCGGTAAAGTAGTTCAGGTGTACCGTAAAAAGTTTGTCGTCTACATCGAGAGGATCCAGAGAGAAAAGGCCAACGGTGCCACCGCATATGTTGGCATCCATCCATCAAAGTGTGTTATCGTCAAACTGAAGATGAACAAAGATCGTAAGGCGATACTCGATCGCAGATCAAAGGGTAGACACCTGGCCACTGGAGGCGGAAAGGGAAAATACACTGAGGAACAAGCTACAGCTATGGAGACCTCGTGA
>DPOGS214523-PA
MKYNKLVTSSRRKNRKRHFSAPSHIRRVLMSAPLSKELKQKFNVKSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRSKGRHLATGGGKGKYTEEQATAMETS-