| DPOGS215030 | ||
|---|---|---|
| Transcript | DPOGS215030-TA | 300 bp |
| Protein | DPOGS215030-PA | 99 aa |
| Genomic position | DPSCF300256 + 387315-387614 | |
| RNAseq coverage | 13x (Rank: top 83%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL008098 | 2e-21 | 47.96% | |
| Bombyx | BGIBMGA005217-TA | 4e-31 | 58.16% | |
| Drosophila | CG3893-PA | 5e-07 | 29.13% | |
| EBI UniRef50 | UniRef50_UPI0002063F1E | 1e-12 | 41.75% | UPI0002063F1E related cluster n=2 Tax=unknown RepID=UPI0002063F1E |
| NCBI RefSeq | XP_001849746.1 | 2e-11 | 35.78% | conserved hypothetical protein [Culex quinquefasciatus] |
| NCBI nr blastp | gi|380015734 | 2e-12 | 41.75% | PREDICTED: gametocyte-specific factor 1-like [Apis florea] |
| NCBI nr blastx | gi|380015734 | 1e-12 | 48.61% | PREDICTED: gametocyte-specific factor 1-like [Apis florea] |
| Group | ||||
|---|---|---|---|---|
| KEGG pathway | ame:413757 | 2e-06 | ||
| K02728 (PSMA4) | maps-> | Proteasome | ||
| InterPro domain | [33-59] IPR022776 | 1e-10 | TRM13/UPF0224 family, U11-48K-like CHHC zinc finger domain | |
| Orthology group | MCL17785 | Patchy | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS215030-TA
ATGGATCCATTTATATCCTGTCCTTACAACTCAGCACACCGTGTCCCGCAGTCTCGTATCCAAGCGCACATAGTGAGATGTCAATCCAAGCACCCAGAGCTGAGTCCTTGTCCTTACAACGCGACACATCGTCTGCCGAAATCAGAGTTGAAGTGTCACGTCCTGTCCTGTCCGTCGCGGAAAGAAATCTTTCCAGACGACAAACCTCTAAAAGTTAAAGCAAATATTACAGCACCGAAGTTTCTACGGCACAGCGACTACTTACCGGAGTCGGATCCCAATCACGAGACATGGGATTGA
>DPOGS215030-PA
MDPFISCPYNSAHRVPQSRIQAHIVRCQSKHPELSPCPYNATHRLPKSELKCHVLSCPSRKEIFPDDKPLKVKANITAPKFLRHSDYLPESDPNHETWD-