DPOGS215154 | ||
---|---|---|
Transcript | DPOGS215154-TA | 891 bp |
Protein | DPOGS215154-PA | 296 aa |
Genomic position | DPSCF300348 - 9475-12379 | |
RNAseq coverage | 2477x (Rank: top 5%) |
Annotation | ||||
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Heliconius | HMEL017373 | 1e-163 | 92.57% |   |
Bombyx | BGIBMGA013965-TA | 1e-154 | 86.82% |   |
Drosophila | ATPsyn-gamma-PC | 7e-124 | 75.54% |   |
EBI UniRef50 | UniRef50_O01666 | 9e-122 | 75.54% | ATP synthase subunit gamma, mitochondrial n=132 Tax=Eukaryota RepID=ATPG_DROME |
NCBI RefSeq | NP_001040428.1 | 3e-153 | 86.82% | H+ transporting ATP synthase gamma subunit [Bombyx mori] |
NCBI nr blastp | gi|114051740 | 6e-152 | 86.82% | H+ transporting ATP synthase gamma subunit [Bombyx mori] |
NCBI nr blastx | gi|114051740 | 3e-141 | 86.82% | H+ transporting ATP synthase gamma subunit [Bombyx mori] |
Group | ||||
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Gene Ontology | GO:0045261 | 6.6e-169 | proton-transporting ATP synthase complex, catalytic core F(1) | |
GO:0015986 | 6.6e-169 | ATP synthesis coupled proton transport | ||
GO:0046961 | 6.6e-169 | proton-transporting ATPase activity, rotational mechanism | ||
GO:0046933 | 6.6e-169 | hydrogen ion transporting ATP synthase activity, rotational mechanism | ||
KEGG pathway | cqu:CpipJ_CPIJ001563 | 1e-129 |   | |
  | K02136 (ATPeF1G, ATP5C1) | maps-> | Huntington's disease | |
  |   |   | Oxidative phosphorylation | |
  |   |   | Alzheimer's disease | |
  |   |   | Parkinson's disease | |
InterPro domain | [12-296] IPR000131 | 6.6e-169 | ATPase, F1 complex, gamma subunit | |
[29-296] IPR023633 | 5.2e-82 | ATPase, F1 complex, gamma subunit domain | ||
Orthology group | MCL14223 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS215154-TA
ATGTTGGGCCGTTTCGCACCGGGTGTCTGTACCCAAGTGACCATGGTGGTCAACCAGCAGCAAAACAGAAACATGGCTACTCTGAAAGCCATTTCTATCCGTTTGAAATCTGTTAAGAACATCCAAAAGATCACCCAGTCAATGAAGATGGTGTCAGCTGCGAAATACACTCGTGCTGAACGTGACTTGAAGGCTGCTCGTCCTTATGGAGAAGGTGCCTCCCAATTCTATGAGAAAGCTGAGGTTTCTGCTCCGGAAGACGAGCCGAAACAGCTTTACATAGCTATCACCTCTGATAGAGGTCTGTGTGGAGCGGTTCACACCGGAGTGTCCAAAGTCATCAGGAACAGACTGTCCGAGCCTGATGCTGACAACATTCGTGTCATCTGTGTTGGTGATAAATCAAGGGGAATATTACAGAGATTGTATGGAAAGCATATCATTACTGTGGCTAACGAGATCGGTCGTTTGCCCCCCACTTTCTTGGATGCTGCCAAATTAGCCAACGCTGTTATGAACTCGGGATATGACTTCGGATCGGGGAAGATCATCTACAACAAGTTCAGATCTGTCGTTTCGTACTCCCAAGCTGATTTGCCGGTTTTCAGTAAGAAGGCTATTGAGAGCGCACCGAAATTGGCCGTATACGACTCCTTGGACTCCGATGTGCTTCAATCCTACATGGAATTCTCGCTGGCTTCCATGCTTTTCTACGCTCTGAAGGAGGGAGCGTGTTCTGAACAGTCATCACGTATGACAGCCATGGATAACGCGTCCAAGAACGCCGGAGAGATGATCGACAAGTTGACCCTGACCTTCAACCGTACTCGGCAGGCCGTCATCACCAGAGAGCTGATCGAGATCATTTCCGGTGCAGCCGCACTCAACTAG
>DPOGS215154-PA
MLGRFAPGVCTQVTMVVNQQQNRNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGASQFYEKAEVSAPEDEPKQLYIAITSDRGLCGAVHTGVSKVIRNRLSEPDADNIRVICVGDKSRGILQRLYGKHIITVANEIGRLPPTFLDAAKLANAVMNSGYDFGSGKIIYNKFRSVVSYSQADLPVFSKKAIESAPKLAVYDSLDSDVLQSYMEFSLASMLFYALKEGACSEQSSRMTAMDNASKNAGEMIDKLTLTFNRTRQAVITRELIEIISGAAALN-