| DPOGS215193 | ||
|---|---|---|
| Transcript | DPOGS215193-TA | 723 bp |
| Protein | DPOGS215193-PA | 240 aa |
| Genomic position | DPSCF300143 - 236671-238270 | |
| RNAseq coverage | 8106x (Rank: top 2%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL009270 | 5e-105 | 76.13% | |
| Bombyx | BGIBMGA008670-TA | 2e-109 | 76.13% | |
| Drosophila | ATPsyn-b-PA | 7e-78 | 65.15% | |
| EBI UniRef50 | UniRef50_G6CK50 | 1e-139 | 100.00% | ATP synthase-like protein n=6 Tax=Pancrustacea RepID=G6CK50_DANPL |
| NCBI RefSeq | NP_001040232.1 | 1e-107 | 75.72% | ATP synthase [Bombyx mori] |
| NCBI nr blastp | gi|23820959 | 2e-108 | 77.46% | ATP synthase-like protein [Choristoneura parallela] |
| NCBI nr blastx | gi|23820959 | 3e-103 | 78.10% | ATP synthase-like protein [Choristoneura parallela] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0015986 | 8.2e-92 | ATP synthesis coupled proton transport | |
| GO:0000276 | 8.2e-92 | mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) | ||
| GO:0015078 | 8.2e-92 | hydrogen ion transmembrane transporter activity | ||
| KEGG pathway | cqu:CpipJ_CPIJ006067 | 2e-86 | ||
| K02127 (ATPeF0B, ATP5F1) | maps-> | Huntington's disease | ||
| Oxidative phosphorylation | ||||
| Alzheimer's disease | ||||
| Parkinson's disease | ||||
| InterPro domain | [2-240] IPR013837 | 8.2e-92 | ATPase, F0 complex subunit B, mitochondrial, metazoa | |
| [74-234] IPR008688 | 8.5e-51 | ATPase, F0 complex, subunit B, mitochondrial | ||
| Orthology group | MCL12413 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS215193-TA
ATGCTATCACGCGTAGCTTTGCGTTCAGTTGCGGCGCGACAGTCCACAGCTCTCGTCCGCACCTCGGCTACAGAATCCGGTGTCCGTGATGAGAAAAACTTCCCCCGTCCCGTGAGGGGAGAACCTGGGAAAGTCAGACTCGGCTTTTTACCCGAAGAATGGTTCCAATTCTTCCATTCCAAAACTGGTGTTACCGGCCCCTACGCATTTGGTGTAGGACTCGCCACGTACCTGTGCAGCAAGGAGATCTATATTATGGAGCATGAATACTACACAGGGCTGTCCATCGCCCTCATGGTGTACTTCGGTACTACTAAGTTTGGACCCAAAATAGCTGCTTGGTTGGATAAGGAAGTCGATGCCGTAGAAAGCAGCTGGAACCAGGGTCGAGAGGAAAGCATTAATGACCTGAAGAAGGCTATCGAGGATGAAAAGGATGCTCAGTGGCGCGCCAACGGTCAGGAACTACTGATAGCTGCCAAGAAAGAAAACGTTCTTCTGCAGCTCGAAGCAGCGTACAGGGAACGCATGATGATGGTTTATAGCGAAGTCAAACGCCGTCTGGATTACCAGCTGGAGAAAACCAACCTGGAGAGACGCATCGCTCAGAAGAATATGGTTGACTGGATCGTGGCCAACGTCACCAAGGCCATTACACCCGACCAAGAGAAGCAGGCCATGGACCGCTGCATCGCAGACCTGGCCGCTCTGGCCGGGAAGTAG
>DPOGS215193-PA
MLSRVALRSVAARQSTALVRTSATESGVRDEKNFPRPVRGEPGKVRLGFLPEEWFQFFHSKTGVTGPYAFGVGLATYLCSKEIYIMEHEYYTGLSIALMVYFGTTKFGPKIAAWLDKEVDAVESSWNQGREESINDLKKAIEDEKDAQWRANGQELLIAAKKENVLLQLEAAYRERMMMVYSEVKRRLDYQLEKTNLERRIAQKNMVDWIVANVTKAITPDQEKQAMDRCIADLAALAGK-