DPOGS215193 | ||
---|---|---|
Transcript | DPOGS215193-TA | 723 bp |
Protein | DPOGS215193-PA | 240 aa |
Genomic position | DPSCF300143 - 236671-238270 | |
RNAseq coverage | 8106x (Rank: top 2%) |
Annotation | ||||
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Heliconius | HMEL009270 | 5e-105 | 76.13% |   |
Bombyx | BGIBMGA008670-TA | 2e-109 | 76.13% |   |
Drosophila | ATPsyn-b-PA | 7e-78 | 65.15% |   |
EBI UniRef50 | UniRef50_G6CK50 | 1e-139 | 100.00% | ATP synthase-like protein n=6 Tax=Pancrustacea RepID=G6CK50_DANPL |
NCBI RefSeq | NP_001040232.1 | 1e-107 | 75.72% | ATP synthase [Bombyx mori] |
NCBI nr blastp | gi|23820959 | 2e-108 | 77.46% | ATP synthase-like protein [Choristoneura parallela] |
NCBI nr blastx | gi|23820959 | 3e-103 | 78.10% | ATP synthase-like protein [Choristoneura parallela] |
Group | ||||
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Gene Ontology | GO:0015986 | 8.2e-92 | ATP synthesis coupled proton transport | |
GO:0000276 | 8.2e-92 | mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) | ||
GO:0015078 | 8.2e-92 | hydrogen ion transmembrane transporter activity | ||
KEGG pathway | cqu:CpipJ_CPIJ006067 | 2e-86 |   | |
  | K02127 (ATPeF0B, ATP5F1) | maps-> | Huntington's disease | |
  |   |   | Oxidative phosphorylation | |
  |   |   | Alzheimer's disease | |
  |   |   | Parkinson's disease | |
InterPro domain | [2-240] IPR013837 | 8.2e-92 | ATPase, F0 complex subunit B, mitochondrial, metazoa | |
[74-234] IPR008688 | 8.5e-51 | ATPase, F0 complex, subunit B, mitochondrial | ||
Orthology group | MCL12413 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS215193-TA
ATGCTATCACGCGTAGCTTTGCGTTCAGTTGCGGCGCGACAGTCCACAGCTCTCGTCCGCACCTCGGCTACAGAATCCGGTGTCCGTGATGAGAAAAACTTCCCCCGTCCCGTGAGGGGAGAACCTGGGAAAGTCAGACTCGGCTTTTTACCCGAAGAATGGTTCCAATTCTTCCATTCCAAAACTGGTGTTACCGGCCCCTACGCATTTGGTGTAGGACTCGCCACGTACCTGTGCAGCAAGGAGATCTATATTATGGAGCATGAATACTACACAGGGCTGTCCATCGCCCTCATGGTGTACTTCGGTACTACTAAGTTTGGACCCAAAATAGCTGCTTGGTTGGATAAGGAAGTCGATGCCGTAGAAAGCAGCTGGAACCAGGGTCGAGAGGAAAGCATTAATGACCTGAAGAAGGCTATCGAGGATGAAAAGGATGCTCAGTGGCGCGCCAACGGTCAGGAACTACTGATAGCTGCCAAGAAAGAAAACGTTCTTCTGCAGCTCGAAGCAGCGTACAGGGAACGCATGATGATGGTTTATAGCGAAGTCAAACGCCGTCTGGATTACCAGCTGGAGAAAACCAACCTGGAGAGACGCATCGCTCAGAAGAATATGGTTGACTGGATCGTGGCCAACGTCACCAAGGCCATTACACCCGACCAAGAGAAGCAGGCCATGGACCGCTGCATCGCAGACCTGGCCGCTCTGGCCGGGAAGTAG
>DPOGS215193-PA
MLSRVALRSVAARQSTALVRTSATESGVRDEKNFPRPVRGEPGKVRLGFLPEEWFQFFHSKTGVTGPYAFGVGLATYLCSKEIYIMEHEYYTGLSIALMVYFGTTKFGPKIAAWLDKEVDAVESSWNQGREESINDLKKAIEDEKDAQWRANGQELLIAAKKENVLLQLEAAYRERMMMVYSEVKRRLDYQLEKTNLERRIAQKNMVDWIVANVTKAITPDQEKQAMDRCIADLAALAGK-