| DPOGS215211 | ||
|---|---|---|
| Transcript | DPOGS215211-TA | 420 bp |
| Protein | DPOGS215211-PA | 139 aa |
| Genomic position | DPSCF300143 + 149423-150247 | |
| RNAseq coverage | 183x (Rank: top 49%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL003870 | 3e-77 | 96.40% | |
| Bombyx | BGIBMGA008717-TA | 7e-73 | 90.65% | |
| Drosophila | CG5161-PA | 4e-50 | 63.24% | |
| EBI UniRef50 | UniRef50_P0DI81 | 2e-52 | 67.39% | Trafficking protein particle complex subunit 2 n=69 Tax=Opisthokonta RepID=TPC2A_HUMAN |
| NCBI RefSeq | XP_002427978.1 | 6e-56 | 71.94% | trafficking protein particle complex protein, putative [Pediculus humanus corporis] |
| NCBI nr blastp | gi|242014607 | 1e-54 | 71.94% | trafficking protein particle complex protein, putative [Pediculus humanus corporis] |
| NCBI nr blastx | gi|242014607 | 7e-55 | 71.94% | trafficking protein particle complex protein, putative [Pediculus humanus corporis] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005622 | 1e-72 | intracellular | |
| GO:0006888 | 1e-72 | ER to Golgi vesicle-mediated transport | ||
| GO:0006810 | 3.8e-44 | transport | ||
| KEGG pathway | ||||
| InterPro domain | [3-140] IPR006722 | 1e-72 | Sedlin | |
| [1-138] IPR011012 | 3.8e-44 | Longin-like | ||
| Orthology group | MCL12048 | Multiple-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS215211-TA
ATGGCCGGTACATATTACTTTGTTATTGTTGGCCACTCCGATAATCCGATTTTCGAAATGGATTTCATTCCAGTGACCAAAGAAGTTAAGAAAGAAGACAACAGACACCTGAACCAGTTCATCGCCCACTCAGCCCTGGATCTGGTTGACGAACACATGTGGAAAGTCACTAACACTTATTTGAAGTCAGTTGATAAATTTAACCAGTGGTTTGTTTCGGCATTTGTTACCGCTAGTCAGATGAGATTTGTGATGGTACATGATGCTCGGAATGAGGATGGCATTAAAAACTTCTTCACCGATGTATATGAATGTTACATAAAGCTGTTGTTGAACCCATTCTACAAGGAGGACACTGTCATCAACTTTCCAGCCTTTGAAAAGAAAGTCCAGCTGCTGGGAAAGAAATATTTAACGTAG
>DPOGS215211-PA
MAGTYYFVIVGHSDNPIFEMDFIPVTKEVKKEDNRHLNQFIAHSALDLVDEHMWKVTNTYLKSVDKFNQWFVSAFVTASQMRFVMVHDARNEDGIKNFFTDVYECYIKLLLNPFYKEDTVINFPAFEKKVQLLGKKYLT-