DPOGS215211 | ||
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Transcript | DPOGS215211-TA | 420 bp |
Protein | DPOGS215211-PA | 139 aa |
Genomic position | DPSCF300143 + 149423-150247 | |
RNAseq coverage | 183x (Rank: top 49%) |
Annotation | ||||
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Heliconius | HMEL003870 | 3e-77 | 96.40% |   |
Bombyx | BGIBMGA008717-TA | 7e-73 | 90.65% |   |
Drosophila | CG5161-PA | 4e-50 | 63.24% |   |
EBI UniRef50 | UniRef50_P0DI81 | 2e-52 | 67.39% | Trafficking protein particle complex subunit 2 n=69 Tax=Opisthokonta RepID=TPC2A_HUMAN |
NCBI RefSeq | XP_002427978.1 | 6e-56 | 71.94% | trafficking protein particle complex protein, putative [Pediculus humanus corporis] |
NCBI nr blastp | gi|242014607 | 1e-54 | 71.94% | trafficking protein particle complex protein, putative [Pediculus humanus corporis] |
NCBI nr blastx | gi|242014607 | 7e-55 | 71.94% | trafficking protein particle complex protein, putative [Pediculus humanus corporis] |
Group | ||||
---|---|---|---|---|
Gene Ontology | GO:0005622 | 1e-72 | intracellular | |
GO:0006888 | 1e-72 | ER to Golgi vesicle-mediated transport | ||
GO:0006810 | 3.8e-44 | transport | ||
KEGG pathway |   | |||
InterPro domain | [3-140] IPR006722 | 1e-72 | Sedlin | |
[1-138] IPR011012 | 3.8e-44 | Longin-like | ||
Orthology group | MCL12048 |   | Multiple-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS215211-TA
ATGGCCGGTACATATTACTTTGTTATTGTTGGCCACTCCGATAATCCGATTTTCGAAATGGATTTCATTCCAGTGACCAAAGAAGTTAAGAAAGAAGACAACAGACACCTGAACCAGTTCATCGCCCACTCAGCCCTGGATCTGGTTGACGAACACATGTGGAAAGTCACTAACACTTATTTGAAGTCAGTTGATAAATTTAACCAGTGGTTTGTTTCGGCATTTGTTACCGCTAGTCAGATGAGATTTGTGATGGTACATGATGCTCGGAATGAGGATGGCATTAAAAACTTCTTCACCGATGTATATGAATGTTACATAAAGCTGTTGTTGAACCCATTCTACAAGGAGGACACTGTCATCAACTTTCCAGCCTTTGAAAAGAAAGTCCAGCTGCTGGGAAAGAAATATTTAACGTAG
>DPOGS215211-PA
MAGTYYFVIVGHSDNPIFEMDFIPVTKEVKKEDNRHLNQFIAHSALDLVDEHMWKVTNTYLKSVDKFNQWFVSAFVTASQMRFVMVHDARNEDGIKNFFTDVYECYIKLLLNPFYKEDTVINFPAFEKKVQLLGKKYLT-