Monarch geneset OGS2.0

DPOGS215213
TranscriptDPOGS215213-TA6756 bp
ProteinDPOGS215213-PA2251 aa
Genomic positionDPSCF300143 + 159603-218324
RNAseq coverage183x (Rank: top 49%)
Annotation
HeliconiusHMEL0038740.051.30% 
BombyxBGIBMGA008719-TA0.054.32% 
DrosophilaGluClalpha-PC0.079.06% 
EBI UniRef50UniRef50_Q949000.077.54%Glutamate-gated chloride channel n=39 Tax=Arthropoda RepID=GLUCL_DROME
NCBI RefSeqXP_001953136.10.080.67%GF17614 [Drosophila ananassae]
NCBI nr blastpgi|2477200660.084.92%glutamate-gated chloride channel [Plutella xylostella]
NCBI nr blastxgi|2477200660.084.92%glutamate-gated chloride channel [Plutella xylostella]
Group
Gene OntologyGO:00160213.2e-228integral to membrane
GO:00068113.2e-228ion transport
GO:00160206e-49membrane
GO:00068106e-49transport
GO:00052306e-49extracellular ligand-gated ion channel activity
GO:00054882e-26binding
KEGG pathway 
InterPro domain[1778-2252] IPR0156803.2e-228Glutamate-Gated Chloride Channel
[1778-2252] IPR0062013.2e-228Neurotransmitter-gated ion-channel
[1867-2051] IPR0062026e-49Neurotransmitter-gated ion-channel ligand-binding
[2052-2244] IPR0060295e-47Neurotransmitter-gated ion-channel transmembrane domain
[2055-2075] IPR0060282e-38Gamma-aminobutyric acid A receptor
[1016-1126] IPR0119902e-26Tetratricopeptide-like helical
Orthology groupMCL10384 Multiple-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS215213-TA
ATGATCAAAATATCAGCATTAAACGGAAACAAAGATACAGAAGAAGAAAATGATTCAGAAATACAGATTTCAGAAGAAGCATTACTACAGATTGCATCCCAGCAATATGCTAAAGCCCTTGAACTGCAGAGGAAAGGGTGCCTGGATGAGGCAACCCAGTTATTAAAGGAATTGTTGGAAACCGAGCTTCTAGATAATGTTAAAATACCTGGCCCTGGTGAGGTTCCATCCGGGCCACTTAATAAATTAAAGTATCTCTGCTATAAGAATCTTGCATATATGTTACAAGAGGCCGGTGACATAGAGTCGGCCATTGAATGCTATAGCGATGCCTCGGATTTTGATGATACTGATGTCACTTTGTGGTACAGAATGGGCTTATTATGCATGCAAGCTAAGCAATACGAAAAAGCTTTACTGGCATTCCAACACGGCTGTCGAAGGAATCCACAACACTGGTTGTGCCTAGACAACATCGTTAAACTTCTATTGGGATTAAATTACAGAGAACAGTGTATAATCACCATCCATGAAGCACTCCAACTTGATCCTGGATATCTGAGAGGAATTGTGTATCGGAGACATATATACACAGTTTATAAATATATGAGGAAATACATGGAAGATTTGAATCCTATATATAAATGGAATGAAGACTTGGACGGTCCCATTGACGAAGCATTAGCTGGCAAGTTATTAAAGGAAGCTGAAGATATCTATGAGTCATTTGTCGAACAGCGGAGAGGGGATAATTTTGTTCATGTAGTACCTCGTATAAAGCTAAAGAAGTCCATAGCAAAGGAAACTTGGGAAGCCGTCGGGGAATCATTGGTCCACATGCACCAATATCAAACAGAACATTGTCTCAGCCATGCTTGTTTTATAGACATCAGTAGTCAGACAGAGAATACGGAAGAATGTATGGAAGTTTGTGAGGAAGAAGATCAATTGAAATCAGCGGAGACTAAATTAAAAGGCAACACTGCTGATACCGAAAAAGTCATGGAGACAGTGTCAGAGAATGAAAATAATGATTTATTAGATAAAGACAAAGCCATGACGGACAGCGAGAAAGTGGAAAGTGATATTGAAATGGTGGCTTCAGAATCAGCAACAGAAAATAATATAGAGGACAAATCAAATAAGAAGAATTCGGTTAGACGGAGAGGAAGTGCATTGAGCTTTTTGCATCCATGGGAATGGTTCACTCGAGGGTCTGTAAGAAAAAAGACGGGCAATATTGTTGATATTCTACGAAAAATGGTACCGCCTCACTTAAAACTCGAGACGGCACGAAAGATAGAGAATCAAACTAAAGAAAGCTCACCAGACATATCAGATCTCGACAAACTCTTTCCTGACGTGTCCATGAATAGAGATGAAGAGAAATTAACCAATGAAACCGAATATTTCGGGAGTGAGGCTGAAGAGACGGACGTGAGGGCTTATATAAAGTTATACACAGAAAATAGTAAAGATATTATCGACATGTTGCATGATTATTTAAAAATATTAAGTGATAAGTGGAACCTGAAGTGGCCGGACGGGTTGTGTAAAGTGTTTGTAGGAGCCGCCGAGTGTTACAAGGATCACGTCGAAGTCCCCACCTGTATGGACGATCCACAGAACTTGACTTACTACTGCCAGGTTAACTTGGTCGCTGAGGAACTGGCAGTGAATGAAAAATTGATGCAGGACTCCGATCAGAAGTCGAAGCATGATTTAAATGTAATATCAGCTATCGATATGATAGTAACTTCGAAGCCACATCTGTTCTCCAATCCGAGCTGCTTGGAAATGATATTGCGGTCGCTGTGGGTCAAATTTCACGTGCATTTGTTTTTAAATAAGTCCGAGGACATGGCGTTGGAGACTGGATACGATCTTCTCGATGAATTCGACGCTATGGGAGAATTCGCTGAAACTTATAGTCTCAACGTAACAAATTTTAAATTTAAAAGCGAAATTAGCAGAAAACATATTTTATCACTCGTACACATGATGGAGAGGAATAAAAAGCTTTTATCCGTCATGGAGTTATATAACCAGGGTAATTATGATCAAGTGATTGCCATTATAACTGAATCCTTCGACGAATGCAAGATTATTGCTATGGAAAGAAAAATTAAGTTGCCTTTGGATTTTCCGATTCAGCTTACTCTGATTCTCGAGAGTTATTGGGCCTCTGACGACGTTCATAACTGTTTAAAGTGGTCATTCATCAGTCTGCACGAATCACTGGAACATTATTTTGATACCAGGTCAGGTTCTGATTACGAAATGTGGACACTGGTCGTCATCAAAATGTTGACCTGCATCCAGCATATACTACTTACGGAAGGAATATTGTGTCTGGACTCAGTCGGTTCGAAGGAGCTTAGCGAGGGAGTCAAAGATTTAATACGGATAATCGGGCATCAGGTGGAGACGAAGAGTTCTGAAATGCCATTCAATACCTTCTCACCGTGGATTATATTGCATTACATCTTGCAGCGAGAGGAGGATCGTGGTAGGGGACGATCGGTCACGGAACAGGACTCCGTATCCTGTAATGGTATTCCGTACCCATTGATGTTACTGTTCATAGCTCATGATAACTTAGGCGAAAGGAATTGGTGTTGTAATTCTGATGGCGAATTCTTATATTTTATTCTCGATACAGTTGCGCCGTGTCTGCGGTCTCCATTGCTGTCTAACTGCTATCAAAATATTTGTCAATATATGGAACAGGTGGTTCTGTGTCTGTACGCTCATCCGAACAAAATCACCAATAAAATGAAACACCTCAGGGATCACAAGGCTGCGCCTAAAGTTCTTAATTGGAAAAGAGCGGAGCAGATTTATGATATTTTCAGACCTGTTAATATACCCGCGATCGAAGGGATCAATCCGGAGATATCCATGGAGACTGAGGCGCTGTTCCAGAGAATTTTATCACTCCTTCCAGCTGAATGCGATCCATCTAAATATATTACAGAAATAGATAAATATATAAAGGGCATTGATGAAAAGCTTACACCGATATCACCAAACTTCCCTTATAAAATAAGAGATATCTATTTATATTTAAGTGATTATTACTTTAAAAGGGAGGATCAACAGAAAGCTATTAAATACAGTATGTTGGATATAACTCTGAATAACGATCGTTTCAACTCCTGGGCTCTGCTGTCGCTCTCGAAGGTTTTCTTCTTAGATAGGTCCTTAAACCTGTACAAAAAACTAAACAATGAAAGGGATTATCTGATTCCCGCAAAGTCAGCGATTCGATGTTTCAAACGAGCGCTAGAACTCAATCCTAGAAATTATACCGTCTGGTTAGAATTTGGAAATTTCGTGTATAATGTACATTCGTATTGTTCGAGACTTCTGAAACAAGACAGCGAATCGCTAAGTATGGAAGAGTTTGCGGCACTTGAACGGCAGAAAGAGGATCTATTGGACGAAAGTTATAAATGCTATACAACAGTTCTGTACGCCCCGGAGGATACAGATTTGACTGAAGATTCGTGGCCACTGTTTTACATGTTGGGTAAAGTTGCAGAGAAGAGAAATAAGCCTCCGTCTGTTTATCTGGATTTTTACATGCAAGGCATCAAGAAACTACACGACGCTAAAGCTTCTTATCCATCGAAAATTAATTACAAATCACCGCCCAATCTGTCGATAAAAGTTTTGGAGTTACATTACAGAATGCACGCGTCCATCCTGAAATACATCGAACAACACGAAAACAAACCCATACCGGCCTCTGTGGGCGAAGTATTCTTAAATTGCATTGAGAAATGGCTTCAAGGGCCCTTTGTTAAGAAACCAAAAGATAATAACGCTACAATGACATCTACATCAATAAGGAATGAGGCTGAAATGGCAAAGAAGTATGAAGAACCACATGCTGCCAATATTCTTAAGAGGTCAATTAGTGACGCTGGTGAAGAGGATACACAAGAAGTCAAACGTTTGAAAATAGAAGCTGCAGCGGCTAAAATAAGACGATCGGCCTCTTACGATACTGAACGTATTGGAATAACGGAGGCTTCGAAGCCAACGTCGCCTGATAAAGAAAATAAAGACGATGATAAAATAGTAACAGTTCCAGAGAAACAACCAGAGTCACAAGAGATTGTTGGCAAGCAAGATGCATCTGCGGAAGTTATACCGGAGAAGGAAAAAGAGAGCGTCGACTACAAAAAAGAGGAAAGCTCCAGCTCTTCCTCGTCCACTTCTTCATCGGACTCGAACTCTAGCGACTCGTCGTCGAGCAGCAGCGACAGTAGTAGTGACACTTCTAGCAAGGCCTCCGAGGAGAACAGACAATTATCAGACGAAGAAATAATGAAGATCGTTTCAGCATGCCTTAACGCTCTGGAAGATTGTGCCATTCGATATCAACCGAATTATAAAGCTATCTACAGACTAGCCCACTATCATTTTTATTATAAAAAAGGACGAGACATCGAAAGATGTAGGGACTTGATGCTGTCAACGTTAACATCACGGTCCGGTCAGAAAATGTGTGGACTGTTCAGCGAGAAGAAAACAAATAACTTCTTCAATAACATTTGGAAATTTCCGGGCACCGACATCGAAAGAGCGGGGGGTTTCGCTTTTCATATGAACCGTTGTGTGTTACTGACCTTGGAGATATTCAAAGAGATTGATGATCACAAAACTCTATTGGATCTGAGCCTACATTTACAAATAGAACCAGATCTGGAAAAGAAGTACTTAAGAGATTCCGATAGGGAGGATTTAGCACAGCAAGCTTTTTCTCTTTGTATCCAGTTACTAAAGGGACAGCTGTTAAGATTCAGCCAGCAGAGTGATTTAAAAACTAACGAGGTGGAGAGACACGCTTTAAAGAGCTTCATGGCAGATATTTATAAGGCTTATCTGAAAGTACAGAAAACTCCGAACGCGAAACATCTGACCACACTACTCGCAGATGCTTACAAATTGATTAGCACGAGCACTATTTCTGAAACCGTCAACTTAGTTGACCTCAGCATTAAATACTGTCAGTCGCTCAACCAAACCCACAAGCAGCAACCCATTATAAATATTGAAAAAAGTCAAAGCTTACCGAAGAAACAAAGCTCTAAATTTCAGACTTCGACCAACAGTTCTGTTGCTAAAGCACCGGTTACAGCTGGCCAATCGAAGGCCGAGTCCAAGTCCAACACGCCCAATATTAGTACAAGTACTGGTCTACCAAAAATTTCAGCTCAGGAAATGGCGGCAGCTTTCCAAAGTTACGTTCCGATGCTCAACGACATTTCTCCACAGGCCGTCGCGGCTTTTCAGAGGATGGACATCTCGAAGCCATCATGCATCCTCGTTCTTCTAATTATCTACATATTAAACCTCGCAGAATGTATGAACGGGAAGATAAACTTCAGGGAGAAGGAGAAACAGATCCTGGACCAGATCCTGGGCCCCGGGAGATACGACGCTCGCATCCGGCCATCCGGCATCAACGGCACTGATGGGCCAGCCGTAGTCAGCGTCAATATATTTGTCCGAAGTATATCAAAAATCGATGACGTCACAATGCGGTTTAACTTCTGTTTTAAATGCGTGTTTTTTTCTCATAAAGGCGATGCGCCAACGTTAGTCCGCGTCAACCTGTACCTACGATCCATCAGCAAAATAGATGATTACAAAATGGAATACTCTGTCCAATTGACATTCAGAGAACAATGGTTAGATGAGAGATTGAAATTTAACAATTTAGGCGATCGTCTCAAGTACCTGACCCTCACGGAAGCCAACAGGGTATGGATGCCGGATCTGTTCTTCTCCAATGAGAAAGAGGGGCACTTCCACAACATCATTATGCCGAACGTGTACATCAGGATCTTCCCCAACGGGAACGTGCTGTACAGCATCCGAATCTCTCTCACCTTGTCATGTCCGATGAACCTAAAGTTATATCCTTTGGACAAGCAGACGTGTTCTCTGAGAATGGCCAGTTACGGCTGGACAACTGACGACTTGGTGTTCCTGTGGAAGGAAGGTGATCCAGTGCAGGTGGTCAAGAACCTGCACCTCCCGCGGTTCACTCTGGAGAAGTTCCTCACAGATTACTGCAACAGCAAGACTAATACTGGTGAATACAGCTGTTTGAAGGTGGACCTGCTGTTCAAGAGAGAGTTCAGTTACTACCTCATCCAGATCTACATTCCCTGCTGCATGCTGGTTATAGTGTCGTGGGTGTCGTTCTGGTTAGACCAGGGAGCCGTTCCCGCCCGAGTGTCCCTTGGAGTGACGACCCTACTGACCATGGCGACTCAGTCGTCCGGGATCAACGCGTCCCTACCCCCCGTCTCGTACACGAAGGCCATCGACGTATGGACGGGGGTGTGTCTGACCTTCGTGTTCGGGGCGCTGTTGGAGTTCGCCCTGGTGAATTATGCGTCCCGCTCCGACATGCACAGGGAGAACATGAAGAAAACGAGACGGGAGATGGAAGCGGCCGCCAGCATGGACGCCGCCTCCGACCTCCTCGACACTGACAGTAACACGACCTTCGCTATGAAGCCGCTGATGCGCGGCGCCGGCGACAAGATGCGGCAGTGCGAGATCCACATCAAGAGCAAGCCCAAGAACTGCTGCCGCCTCTGGATGTCCAAGTTCCCGACTCGCTCCAAGCGCATCGACGTCATATCACGCATCACCTTCCCGCTGGTGTTCGCGCTCTTCAACCTCGCCTACTGGTCCACGTACTTGTTCCGTGACGAGGACGAAGAGAAGTGA

Protein sequence:

>DPOGS215213-PA
MIKISALNGNKDTEEENDSEIQISEEALLQIASQQYAKALELQRKGCLDEATQLLKELLETELLDNVKIPGPGEVPSGPLNKLKYLCYKNLAYMLQEAGDIESAIECYSDASDFDDTDVTLWYRMGLLCMQAKQYEKALLAFQHGCRRNPQHWLCLDNIVKLLLGLNYREQCIITIHEALQLDPGYLRGIVYRRHIYTVYKYMRKYMEDLNPIYKWNEDLDGPIDEALAGKLLKEAEDIYESFVEQRRGDNFVHVVPRIKLKKSIAKETWEAVGESLVHMHQYQTEHCLSHACFIDISSQTENTEECMEVCEEEDQLKSAETKLKGNTADTEKVMETVSENENNDLLDKDKAMTDSEKVESDIEMVASESATENNIEDKSNKKNSVRRRGSALSFLHPWEWFTRGSVRKKTGNIVDILRKMVPPHLKLETARKIENQTKESSPDISDLDKLFPDVSMNRDEEKLTNETEYFGSEAEETDVRAYIKLYTENSKDIIDMLHDYLKILSDKWNLKWPDGLCKVFVGAAECYKDHVEVPTCMDDPQNLTYYCQVNLVAEELAVNEKLMQDSDQKSKHDLNVISAIDMIVTSKPHLFSNPSCLEMILRSLWVKFHVHLFLNKSEDMALETGYDLLDEFDAMGEFAETYSLNVTNFKFKSEISRKHILSLVHMMERNKKLLSVMELYNQGNYDQVIAIITESFDECKIIAMERKIKLPLDFPIQLTLILESYWASDDVHNCLKWSFISLHESLEHYFDTRSGSDYEMWTLVVIKMLTCIQHILLTEGILCLDSVGSKELSEGVKDLIRIIGHQVETKSSEMPFNTFSPWIILHYILQREEDRGRGRSVTEQDSVSCNGIPYPLMLLFIAHDNLGERNWCCNSDGEFLYFILDTVAPCLRSPLLSNCYQNICQYMEQVVLCLYAHPNKITNKMKHLRDHKAAPKVLNWKRAEQIYDIFRPVNIPAIEGINPEISMETEALFQRILSLLPAECDPSKYITEIDKYIKGIDEKLTPISPNFPYKIRDIYLYLSDYYFKREDQQKAIKYSMLDITLNNDRFNSWALLSLSKVFFLDRSLNLYKKLNNERDYLIPAKSAIRCFKRALELNPRNYTVWLEFGNFVYNVHSYCSRLLKQDSESLSMEEFAALERQKEDLLDESYKCYTTVLYAPEDTDLTEDSWPLFYMLGKVAEKRNKPPSVYLDFYMQGIKKLHDAKASYPSKINYKSPPNLSIKVLELHYRMHASILKYIEQHENKPIPASVGEVFLNCIEKWLQGPFVKKPKDNNATMTSTSIRNEAEMAKKYEEPHAANILKRSISDAGEEDTQEVKRLKIEAAAAKIRRSASYDTERIGITEASKPTSPDKENKDDDKIVTVPEKQPESQEIVGKQDASAEVIPEKEKESVDYKKEESSSSSSSTSSSDSNSSDSSSSSSDSSSDTSSKASEENRQLSDEEIMKIVSACLNALEDCAIRYQPNYKAIYRLAHYHFYYKKGRDIERCRDLMLSTLTSRSGQKMCGLFSEKKTNNFFNNIWKFPGTDIERAGGFAFHMNRCVLLTLEIFKEIDDHKTLLDLSLHLQIEPDLEKKYLRDSDREDLAQQAFSLCIQLLKGQLLRFSQQSDLKTNEVERHALKSFMADIYKAYLKVQKTPNAKHLTTLLADAYKLISTSTISETVNLVDLSIKYCQSLNQTHKQQPIINIEKSQSLPKKQSSKFQTSTNSSVAKAPVTAGQSKAESKSNTPNISTSTGLPKISAQEMAAAFQSYVPMLNDISPQAVAAFQRMDISKPSCILVLLIIYILNLAECMNGKINFREKEKQILDQILGPGRYDARIRPSGINGTDGPAVVSVNIFVRSISKIDDVTMRFNFCFKCVFFSHKGDAPTLVRVNLYLRSISKIDDYKMEYSVQLTFREQWLDERLKFNNLGDRLKYLTLTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGNVLYSIRISLTLSCPMNLKLYPLDKQTCSLRMASYGWTTDDLVFLWKEGDPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQSSGINASLPPVSYTKAIDVWTGVCLTFVFGALLEFALVNYASRSDMHRENMKKTRREMEAAASMDAASDLLDTDSNTTFAMKPLMRGAGDKMRQCEIHIKSKPKNCCRLWMSKFPTRSKRIDVISRITFPLVFALFNLAYWSTYLFRDEDEEK-