Monarch geneset OGS2.0

DPOGS215304
TranscriptDPOGS215304-TA714 bp
ProteinDPOGS215304-PA237 aa
Genomic positionDPSCF300120 - 307292-326956
RNAseq coverage51x (Rank: top 70%)
Annotation
HeliconiusHMEL0100114e-5658.41% 
Bombyx% 
DrosophilaLsm11-PA4e-1831.47% 
EBI UniRef50UniRef50_E3WXE88e-2534.03%Putative uncharacterized protein n=1 Tax=Anopheles darlingi RepID=E3WXE8_ANODA
NCBI RefSeqXP_001606444.16e-3135.68%PREDICTED: similar to ENSANGP00000018479 [Nasonia vitripennis]
NCBI nr blastpgi|1565441831e-2935.68%PREDICTED: U7 snRNA-associated Sm-like protein LSm11-like [Nasonia vitripennis]
NCBI nr blastxgi|1565441833e-3035.68%PREDICTED: U7 snRNA-associated Sm-like protein LSm11-like [Nasonia vitripennis]
Group
KEGG pathway 
InterPro domain[146-232] IPR0011633.2e-15Like-Sm ribonucleoprotein (LSM) domain
[118-235] IPR0109205.9e-14Like-Sm ribonucleoprotein (LSM)-related domain
[122-233] IPR0066495.5e-09Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type
Orthology groupMCL17302 Insect specific
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS215304-TA
ATGTCTGAAGGATCTTCATCTGAGTCGGAAACTAGTGCTTGTAGTTCCAAATACGATCCCCTCAAGGCACTTTATTCAGAAAAACCCAAGTTGCCAGATAAAAAGGCGCCGATGTACGAGAATTTAGTTCAATACGAGGCCGCTTTGAAATATAATGATTCGCAAAGTTCTGCTATTATACCAGTAGGTCAAACTAAGCTCGTACAGCAGCGAGAAGAAGAGAAGGAACGAAAGAAGCAGGAACAGCAACGATTACTTGAAGAAAAGAATAAACAGCGCTTTGCACAATATGAAGTACCGGTTCGGAAGGAGAGGCGAGTGAAAAACGTACTCACTCGTATAGAGGGTATCCAGGGACCCCTCGCCGCTCTCAGGGATTGCGTCGACTTGGAGTTAAGGATTAAGGTAATAACGAGACACGCGACCGGCGTCCGGGGAGAACTCTACGGGACCCTGGTGGCCTTCGACAAGCAGTGGAACCTCGCGCTACGTGACGTGGTCGAGGTGTGGCGGAGGAAGGCTCCAGGGAAGAGGAAAATACCACCCGGGTTAGGTACCCCAGTACAGAAAGGTACTGCGGCCGCTATATCGCCTGTGCCAGTGGTGACGGAGACTCCCTTGGGTGGCGGCAGGTGGGAGTGCACCAGACACCTCCCCCAGATGATGGTACGTGGGGAACATGTGGTGTTGGTGAACGTGGTGGAGAGGCGGTGA

Protein sequence:

>DPOGS215304-PA
MSEGSSSESETSACSSKYDPLKALYSEKPKLPDKKAPMYENLVQYEAALKYNDSQSSAIIPVGQTKLVQQREEEKERKKQEQQRLLEEKNKQRFAQYEVPVRKERRVKNVLTRIEGIQGPLAALRDCVDLELRIKVITRHATGVRGELYGTLVAFDKQWNLALRDVVEVWRRKAPGKRKIPPGLGTPVQKGTAAAISPVPVVTETPLGGGRWECTRHLPQMMVRGEHVVLVNVVERR-