| DPOGS215496 | ||
|---|---|---|
| Transcript | DPOGS215496-TA | 651 bp |
| Protein | DPOGS215496-PA | 216 aa |
| Genomic position | DPSCF300098 + 589504-591659 | |
| RNAseq coverage | 2476x (Rank: top 5%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | % | |||
| Bombyx | BGIBMGA007453-TA | 1e-104 | 81.28% | |
| Drosophila | Sod2-PA | 9e-83 | 66.36% | |
| EBI UniRef50 | UniRef50_Q00637 | 3e-80 | 65.89% | Superoxide dismutase [Mn], mitochondrial n=33 Tax=Eukaryota RepID=SODM_DROME |
| NCBI RefSeq | NP_001037299.1 | 4e-105 | 83.18% | Mn superoxide dismutase [Bombyx mori] |
| NCBI nr blastp | gi|148719710 | 5e-106 | 85.05% | putative mitochondrial Mn superoxide dismutase [Galleria mellonella] |
| NCBI nr blastx | gi|148719710 | 7e-104 | 85.05% | putative mitochondrial Mn superoxide dismutase [Galleria mellonella] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0006801 | 1.5e-123 | superoxide metabolic process | |
| GO:0004784 | 1.5e-123 | superoxide dismutase activity | ||
| GO:0046872 | 1.5e-123 | metal ion binding | ||
| GO:0055114 | 1.5e-123 | oxidation-reduction process | ||
| KEGG pathway | nvi:100113999 | 8e-91 | ||
| K04564 (E1.15.1.1A, sodA, sodB, SOD2) | maps-> | Huntington's disease | ||
| Peroxisome | ||||
| InterPro domain | [3-214] IPR001189 | 1.5e-123 | Manganese/iron superoxide dismutase | |
| [105-216] IPR019832 | 1.3e-40 | Manganese/iron superoxide dismutase, C-terminal | ||
| [8-102] IPR019831 | 1.1e-37 | Manganese/iron superoxide dismutase, N-terminal | ||
| Orthology group | MCL15070 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS215496-TA
ATGTTCGCGACTCGCAGAATCGGCTCTCTGATTCGGAATGTCGGCGCATCTCGTCTGAAGCATACTCTTCCGGATTTACCGTATGAGTACAGCGCGTTGGAGCCTGTGATCAGTCGAGAGATTATGAGTTTGCATCACTCCAAGCATCATGCAACTTATGTAAACAATTTGAATGCAGCTGAAGAAAAACTTGCTGCTGCCCAGTCGAAAGGAGACATACAGACCGTGATCAACCTGGCACCTGCCTTGAAATTCAATGGAGGTGGTCACATCAATCACACTATTTTCTGGCAGAACCTTTCCCCGAAAGGGGGTAAACCATCTGCCGATCTCACCAAAGCCATTGAAAATGATTTTGGTTCAATGGAGAATATGAAGAACCAGCTCGCAGCAGCATCTGTGGCTGTGCAAGGTTCAGGCTGGGGTTGGCTTGGTTACAATAAACTCATGAAGAAGTTACAGATTGCTACATGCCAGAATCAAGATCCTTTGGAACCCACAACTGGTATTGTTCCGCTATTCGGTATTGATGTGTGGGAACACGCCTACTACTTACAATATAAGAATGTAAGAGCTGATTATGTCAAAGCTATCTTCGACATTGCCAATTGGGAGGACATCTCATTCAGATACAAGAATGCAGCTAATTAA
>DPOGS215496-PA
MFATRRIGSLIRNVGASRLKHTLPDLPYEYSALEPVISREIMSLHHSKHHATYVNNLNAAEEKLAAAQSKGDIQTVINLAPALKFNGGGHINHTIFWQNLSPKGGKPSADLTKAIENDFGSMENMKNQLAAASVAVQGSGWGWLGYNKLMKKLQIATCQNQDPLEPTTGIVPLFGIDVWEHAYYLQYKNVRADYVKAIFDIANWEDISFRYKNAAN-