| DPOGS215526 | ||
|---|---|---|
| Transcript | DPOGS215526-TA | 537 bp |
| Protein | DPOGS215526-PA | 178 aa |
| Genomic position | DPSCF300467 + 34024-35013 | |
| RNAseq coverage | 2x (Rank: top 92%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL009622 | 3e-88 | 92.70% | |
| Bombyx | BGIBMGA014064-TA | 4e-84 | 90.40% | |
| Drosophila | l(1)G0004-PA | 7e-81 | 76.40% | |
| EBI UniRef50 | UniRef50_Q9VR89 | 8e-79 | 76.40% | RNA-binding protein pno1 n=73 Tax=Eukaryota RepID=PNO1_DROME |
| NCBI RefSeq | XP_001355628.1 | 3e-80 | 77.53% | GA11169 [Drosophila pseudoobscura pseudoobscura] |
| NCBI nr blastp | gi|350402838 | 5e-81 | 81.71% | PREDICTED: RNA-binding protein pno1-like [Bombus impatiens] |
| NCBI nr blastx | gi|110757313 | 3e-78 | 82.76% | PREDICTED: RNA-binding protein pno1-like [Apis mellifera] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0003723 | 2.9e-06 | RNA binding | |
| KEGG pathway | ||||
| InterPro domain | [105-151] IPR018111 | 2.9e-06 | K Homology, type 1, subgroup | |
| Orthology group | ||||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS215526-TA
ATGAAAGTCATTATAATACCAAAATCATTATATACACCTTTAAGAGAGAATTGGTTAAAAATATTCACACCTATAGTAGAACACTTATTGTTACAAGTCCGTTTTAATACAAAAACTCGCAACGTCGAGATCAGAGTTGGTCCAGAGACAAAAGACATTGCTAATCTACAGAAAGCCGCTGATTTTGTTAAGGCTTTTATATATGGTTTTGAAGTTGACGATGCACTAGCCTTACTCAGATTGGATGATTTATTCGTTGAATCCTTTGAAATTAAGGATGTGAAAACATTGCAAGGTGATCATTTGGGAAGGGCTATCGGCAGGCTGGCCGGTAAGGCGGGACGGACAAAGTTCACTATAGAGAATGTGACTAAGACCAGGATAGTATTGGCCGACTCCAAAATTCATATATTGGGAAGTTTCCAGAATATAGCGCTAGCAAGAAGAGCCATTTGTAACTTGATAATGGGCTCGCCGCCATCCAAAGTTTACGGGAATCTAAGGAATGTTGCCAAAAGGGTCGCGGAGAGATTTTAG
>DPOGS215526-PA
MKVIIIPKSLYTPLRENWLKIFTPIVEHLLLQVRFNTKTRNVEIRVGPETKDIANLQKAADFVKAFIYGFEVDDALALLRLDDLFVESFEIKDVKTLQGDHLGRAIGRLAGKAGRTKFTIENVTKTRIVLADSKIHILGSFQNIALARRAICNLIMGSPPSKVYGNLRNVAKRVAERF-